RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 ME2P23368 584 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 CHMP24386 653 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 GSK3BP49841 420 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 SUMO3P55854 103 aaPredicted RBP10.02□□□□□ -0.81
APTX-230ENST00000494649 NUP107P57740 925 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 RBBP4Q09028 425 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 EPS8Q12929 822 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 TMEM44Q2T9K0 475 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 TMEM176BQ3YBM2 270 aaPredicted RBP10.02□□□□□ -0.81
APTX-230ENST00000494649 ACSF3Q4G176 576 aaPredicted RBP10.02□□□□□ -0.81
APTX-230ENST00000494649 C1orf185Q5T7R7 199 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 RNF220Q5VTB9 566 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 AP1ARQ63HQ0 302 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 B3GNT6Q6ZMB0 384 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 RINLQ6ZS11 566 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 SEM1Q6ZVN7 128 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 TRPM8Q7Z2W7 1104 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 GGNQ86UU5 652 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 RBM45Q8IUH3 476 aaKnown RBP10.02□□□□□ -0.81
APTX-230ENST00000494649 LACC1Q8IV20 430 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 DEFB107AQ8IZN7 70 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 GPR32P1Q8NGA4 272 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 RNF217Q8TC41 542 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 TTYH2Q9BSA4 534 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 SPATA9Q9BWV2 254 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 OR11A1Q9GZK7 315 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 SPAG4Q9NPE6 437 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 MRPS18CQ9Y3D5 142 aaKnown RBP10.02□□□□□ -0.81
APTX-230ENST00000494649 A0A087WZY1 265 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 PRORSD1PA6NEY8 169 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 UBOX5O94941 541 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 LDLRP01130 860 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 T-ENOLP0DO92 83 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 TACR3P29371 465 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 ACAA2P42765 397 aaKnown RBP10.02□□□□□ -0.81
APTX-230ENST00000494649 CBX1P83916 185 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 BNIP2Q12982 314 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 SGCBQ16585 318 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.02□□□□□ -0.81
APTX-230ENST00000494649 PRAMEF8Q5VWM4 474 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 PRAMEF7Q5VXH5 474 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 PLEKHM3Q6ZWE6 761 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 ARPINQ7Z6K5 226 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 CMIPQ8IY22 773 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 MICU2Q8IYU8 434 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 GCNT2Q8N0V5 402 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 METTL25Q8N6Q8 603 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 RBM15BQ8NDT2 890 aaKnown RBP10.02□□□□□ -0.81
APTX-230ENST00000494649 TNIP2Q8NFZ5 429 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 DTNBP1Q96EV8 351 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 NSL1Q96IY1 281 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 TPD52L3Q96J77 140 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 CDRT15Q96T59 188 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 KCTD14Q9BQ13 255 aaPredicted RBP10.02□□□□□ -0.81
APTX-230ENST00000494649 SPATA5L1Q9BVQ7 753 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 SLC13A4Q9UKG4 626 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 SH3GLB1Q9Y371 365 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 LRRK2Q5S007 2527 aa10.02□□□□□ -0.81
APTX-230ENST00000494649 SETXQ7Z333 2677 aaKnown RBP10.01□□□□□ -0.81
APTX-230ENST00000494649 A0A0J9YW62 118 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 E9PLN8 166 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 GSTA4O15217 222 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 CXCL13O43927 109 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 WDR1O75083 606 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 TOXO94900 526 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 TGM6O95932 706 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 GLI4P10075 376 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 TFPIP10646 304 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 GP1BBP13224 206 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 ZNF17P17021 662 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 PRKAR1BP31321 381 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 OR1E2P47887 323 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 RGS8P57771 180 aaPredicted RBP10.01□□□□□ -0.81
APTX-230ENST00000494649 KRT72Q14CN4 511 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 PON3Q15166 354 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 HACD2Q6Y1H2 254 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 CHMP1BQ7LBR1 199 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 PM20D2Q8IYS1 436 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 MEIOBQ8N635 442 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 NAXEQ8NCW5 288 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 OR4D11Q8NGI4 311 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 OR10D3Q8NH80 312 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 SDCCAG3Q96C92 435 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 MRGPRX4Q96LA9 322 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 DMRTA2Q96SC8 542 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 VKORC1Q9BQB6 163 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 ARMC7Q9H6L4 198 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 EXOSC3Q9NQT5 275 aaKnown RBP10.01□□□□□ -0.81
APTX-230ENST00000494649 V9GYQ6 96 aa10.01□□□□□ -0.81
APTX-230ENST00000494649 IGHV3-15A0A0B4J1V0 119 aa10□□□□□ -0.81
APTX-230ENST00000494649 TPST2O60704 377 aa10□□□□□ -0.81
APTX-230ENST00000494649 NTN1O95631 604 aa10□□□□□ -0.81
APTX-230ENST00000494649 CPN1P15169 458 aa10□□□□□ -0.81
APTX-230ENST00000494649 KLK2P20151 261 aa10□□□□□ -0.81
APTX-230ENST00000494649 HTR2AP28223 471 aa10□□□□□ -0.81
APTX-230ENST00000494649 EIF1P41567 113 aaKnown RBP10□□□□□ -0.81
APTX-230ENST00000494649 SLC6A8P48029 635 aa10□□□□□ -0.81
APTX-230ENST00000494649 COPZ1P61923 177 aa10□□□□□ -0.81
APTX-230ENST00000494649 CTU2Q2VPK5 515 aaKnown RBP10□□□□□ -0.81
APTX-230ENST00000494649 INTS11Q5TA45 600 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms