RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 CSF3RQ99062 836 aa10.78□□□□□ -0.68
BRCA1-222ENST00000493919 TRMOQ9BU70 441 aa10.78□□□□□ -0.68
BRCA1-222ENST00000493919 ENKD1Q9H0I2 346 aa10.78□□□□□ -0.68
BRCA1-222ENST00000493919 SLC6A13Q9NSD5 602 aa10.78□□□□□ -0.68
BRCA1-222ENST00000493919 POFUT2Q9Y2G5 429 aa10.78□□□□□ -0.68
BRCA1-222ENST00000493919 MAB21L2Q9Y586 359 aa10.78□□□□□ -0.68
BRCA1-222ENST00000493919 FREM2Q5SZK8 3169 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 RP1P56715 2156 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 KIR2DS5A0A0G2JLQ3 304 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 A0A0G2JNG1 304 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 C7orf72A4D263 438 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 AGAP5A6NIR3 686 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 PRR19A6NJB7 356 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 MKRN2OSH3BPM6 223 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 KIR2DS3K7RE56 304 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 OIP5O43482 229 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 SLC28A2O43868 658 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 TRIM13O60858 407 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 ACSL3O95573 720 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 VIPP01282 170 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 ZNF25P17030 456 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-222ENST00000493919 PVALBP20472 110 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-222ENST00000493919 PTNP21246 168 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 SSTR1P30872 391 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 CD96P40200 585 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 PTGFRP43088 359 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 NME5P56597 212 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 MAB21L1Q13394 359 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 KIR2DS5Q14953 304 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 COQ5Q5HYK3 327 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 CTSL3PQ5NE16 218 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 NXNL2Q5VZ03 156 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 METRNLQ641Q3 311 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 SLITRK4Q8IW52 837 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 ZNF679Q8IYX0 411 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 YIPF7Q8N8F6 280 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 OR7A2PQ8NGA2 310 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 GCDHQ92947 438 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-222ENST00000493919 TMEM159Q96B96 161 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 CMTM5Q96DZ9 223 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 NUDT11Q96G61 164 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 ING2Q9H160 280 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 P2RY12Q9H244 342 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 POFUT1Q9H488 388 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 PRPF19Q9UMS4 504 aaKnown RBP10.77□□□□□ -0.69
BRCA1-222ENST00000493919 ZNF451Q9Y4E5 1061 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 NCOR2Q9Y618 2525 aa10.77□□□□□ -0.69
BRCA1-222ENST00000493919 ASXL3Q9C0F0 2248 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 PRAMEF33A0A0G2JMD5 474 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 PRODHO43272 600 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 PIAS1O75925 651 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 GABARAPO95166 117 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 CBX7O95931 251 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 S1PR4O95977 384 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 LDLRP01130 860 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 RPLP0P05388 317 aaKnown RBP10.76□□□□□ -0.69
BRCA1-222ENST00000493919 C2P06681 752 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 FGF2P09038 288 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 OR2T7P0C7T2 308 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 RPS3P23396 243 aaKnown RBP eCLIP10.76□□□□□ -0.69
BRCA1-222ENST00000493919 KCNJ3P48549 501 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 CEBPDP49716 269 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-222ENST00000493919 RAP1BP61224 184 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 RAP1AP62834 184 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 SORDQ00796 357 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 ZNF155Q12901 538 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-222ENST00000493919 LCP2Q13094 533 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 AMZ1Q400G9 498 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 AKIRIN2Q53H80 203 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 CYHR1Q6ZMK1 362 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 NDUFAF7Q7L592 441 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 STPG2Q8N412 459 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 TMEM102Q8N9M5 508 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-222ENST00000493919 SEMA6DQ8NFY4 1073 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 OR4K15Q8NH41 348 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 OR2V1Q8NHB1 315 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 C9orf43Q8TAL5 461 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-222ENST00000493919 C16orf78Q8WTQ4 265 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 ATXN7L3BQ96GX2 97 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 PACRGQ96M98 296 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-222ENST00000493919 SLC38A3Q99624 504 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 PRRT1Q99946 306 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 NKX6-2Q9C056 277 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-222ENST00000493919 SRA1Q9HD15 236 aaKnown RBP10.76□□□□□ -0.69
BRCA1-222ENST00000493919 NAGKQ9UJ70 344 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 PCDHB1Q9Y5F3 818 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 CLCA3PQ9Y6N3 262 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 CEP295Q9C0D2 2601 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 ARHGEF33A8MVX0 844 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 TRDCB7Z8K6 153 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 CCSO14618 274 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 HYAL3O43820 417 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-222ENST00000493919 OR10H2O60403 315 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 SNAPC5O75971 98 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 MED26O95402 600 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 ESR1P03372 595 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 METTL15P1P0C7V9 234 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 ETV6P41212 452 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 SLC19A1P41440 591 aa10.76□□□□□ -0.69
BRCA1-222ENST00000493919 HTR5AP47898 357 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms