RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 ELF3P78545 371 aaPredicted RBP12.19□□□□□ -0.46
MSH6-208ENST00000493177 HSF1Q00613 529 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 PLAURQ03405 335 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 EPS8Q12929 822 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 CBFBQ13951 182 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 TOMM20Q15388 145 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 PLEKHM3Q6ZWE6 761 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 CYP4Z1Q86W10 505 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 PLCZ1Q86YW0 608 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 ZDHHC21Q8IVQ6 265 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 CADM2Q8N3J6 435 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 FAM71CQ8NEG0 241 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 OR2M7Q8NG81 312 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 OR5W2Q8NH69 310 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 RNF217Q8TC41 542 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 SLC35B4Q969S0 331 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 RELTQ969Z4 430 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 MCHR1Q99705 422 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 CHID1Q9BWS9 393 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 AMBRA1Q9C0C7 1298 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 PTGES2Q9H7Z7 377 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 YY1AP1Q9H869 796 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 TMEM27Q9HBJ8 222 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 CTPS2Q9NRF8 586 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 DEPPQ9NTK1 212 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 CCM2LQ9NUG4 571 aaPredicted RBP12.19□□□□□ -0.46
MSH6-208ENST00000493177 RPS6KB2Q9UBS0 482 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 TESQ9UGI8 421 aaKnown RBP12.19□□□□□ -0.46
MSH6-208ENST00000493177 TINAGQ9UJW2 476 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 AP4S1Q9Y587 144 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 GTF3C1Q12789 2109 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 MYO7BQ6PIF6 2116 aa12.19□□□□□ -0.46
MSH6-208ENST00000493177 PINLYPA6NC86 204 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 WIPF3A6NGB9 483 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 CPSF4LA6NMK7 179 aaKnown RBP12.18□□□□□ -0.46
MSH6-208ENST00000493177 FAM166BA8MTA8 275 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 ADAM10O14672 748 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 TRIM3O75382 744 aaPredicted RBP12.18□□□□□ -0.46
MSH6-208ENST00000493177 CLDN1O95832 211 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 SEMG1P04279 462 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 TPOP07202 933 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 ITGA2P17301 1181 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 TCEA1P23193 301 aaKnown RBP12.18□□□□□ -0.46
MSH6-208ENST00000493177 ELAVL4P26378 380 aaKnown RBP12.18□□□□□ -0.46
MSH6-208ENST00000493177 COL8A1P27658 744 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 IFNA8P32881 189 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 IDH2P48735 452 aaKnown RBP12.18□□□□□ -0.46
MSH6-208ENST00000493177 SUMO3P55854 103 aaPredicted RBP12.18□□□□□ -0.46
MSH6-208ENST00000493177 TAS2R41P59536 307 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 FOXD4Q12950 439 aaPredicted RBP12.18□□□□□ -0.46
MSH6-208ENST00000493177 NPTX1Q15818 432 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 C3AR1Q16581 482 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 TIGD3Q6B0B8 471 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 ZFP1Q6P2D0 407 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 SLC22A16Q86VW1 577 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 WDSUB1Q8N9V3 476 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 OR2M3Q8NG83 312 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 SLCO4A1Q96BD0 722 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 CCDC120Q96HB5 630 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 GNRHR2Q96P88 292 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 ZNF559Q9BR84 538 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 PRR14Q9BWN1 585 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 EXO5Q9H790 373 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 S100A14Q9HCY8 104 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 ZFP64Q9NPA5 681 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 IL1RAPQ9NPH3 570 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 SELENONQ9NZV5 590 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 B4GALT7Q9UBV7 327 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 DKKL1Q9UK85 242 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 FBXL2Q9UKC9 423 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 ICAM5Q9UMF0 924 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 HRH3Q9Y5N1 445 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 ENPP4Q9Y6X5 453 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 ICE1Q9Y2F5 2266 aa12.18□□□□□ -0.46
MSH6-208ENST00000493177 DIDO1Q9BTC0 2240 aaKnown RBP12.18□□□□□ -0.46
MSH6-208ENST00000493177 IGLV3-32A0A0A0MS00 114 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 A0A1B0GTH9 108 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 PRSS44E7EML9 344 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 J3KTA2 159 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 TIPRLO75663 272 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 KRT36O76013 467 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 DIRAS1O95057 198 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 HOXB6P17509 224 aaKnown RBP12.17□□□□□ -0.46
MSH6-208ENST00000493177 PTGS2P35354 604 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 ACAA2P42765 397 aaKnown RBP12.17□□□□□ -0.46
MSH6-208ENST00000493177 ZNF41P51814 821 aaPredicted RBP12.17□□□□□ -0.46
MSH6-208ENST00000493177 ZNF136P52737 540 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 SMSP52788 366 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 PPIAP62937 165 aaKnown RBP12.17□□□□□ -0.46
MSH6-208ENST00000493177 VLDLRP98155 873 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 OR1Q1Q15612 314 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 RNFT1Q5M7Z0 435 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 ENTPD8Q5MY95 495 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 RPTNQ6XPR3 784 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 MRGPRGQ86SM5 289 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 SIAH3Q8IW03 269 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 FADS6Q8N9I5 356 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 ZFP62Q8NB50 900 aaPredicted RBP12.17□□□□□ -0.46
MSH6-208ENST00000493177 GPR119Q8TDV5 335 aa12.17□□□□□ -0.46
MSH6-208ENST00000493177 DTNBP1Q96EV8 351 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms