RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 TTC21BQ7Z4L5 1316 aa2.86□□□□□ -1.95
CLK1-213ENST00000492793 IGHV2-70DA0A0C4DH43 119 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 A0A1B0GVY2 172 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 VSTM2BA6NLU5 285 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 PP2D1A8MPX8 630 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 ZNF705EA8MWA4 302 aaPredicted RBP2.85□□□□□ -1.95
CLK1-213ENST00000492793 HIP1O00291 1037 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 CPLX1O14810 134 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 MAGEB3O15480 346 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 PRKYO43930 277 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 KRT8P05787 483 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 H2BFMP0C1H6 154 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 RNH1P13489 461 aaKnown RBP2.85□□□□□ -1.95
CLK1-213ENST00000492793 CCDC130P13994 396 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 ZNF19P17023 458 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 POLR2EP19388 210 aaKnown RBP2.85□□□□□ -1.95
CLK1-213ENST00000492793 GABRR1P24046 479 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 YWHABP31946 246 aaKnown RBP2.85□□□□□ -1.95
CLK1-213ENST00000492793 LEPP41159 167 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 PRKXP51817 358 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 PLK1P53350 603 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 HSPA2P54652 639 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 KRTAP10-5P60370 271 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 TIMM10P62072 90 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 ZNF45Q02386 682 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 CSTF1Q05048 431 aaKnown RBP2.85□□□□□ -1.95
CLK1-213ENST00000492793 CHRNB3Q05901 458 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 CCDC173Q0VFZ6 552 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 ELAVL3Q14576 367 aaKnown RBP2.85□□□□□ -1.95
CLK1-213ENST00000492793 TAF7Q15545 349 aaPredicted RBP2.85□□□□□ -1.95
CLK1-213ENST00000492793 CFAP221Q4G0U5 840 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 TTC23Q5W5X9 447 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 TMEM225Q6GV28 225 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 CCDC80Q76M96 950 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 MOB3BQ86TA1 216 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 TGIF2LYQ8IUE0 185 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 CCDC50Q8IVM0 306 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 CCDC65Q8IXS2 484 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 TMEM252Q8N6L7 170 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 SYT14Q8NB59 555 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 GMCL1P1Q8NEA9 526 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 ZNF564Q8TBZ8 553 aaPredicted RBP2.85□□□□□ -1.95
CLK1-213ENST00000492793 PAQR8Q8TEZ7 354 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 C7orf34Q96L11 122 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 AMDHD1Q96NU7 426 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 CITED1Q99966 193 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 GAL3ST1Q99999 423 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 GLIPR2Q9H4G4 154 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 ONECUT1Q9UBC0 465 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 ANGPTL2Q9UKU9 493 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 CELA1Q9UNI1 258 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 ZNF256Q9Y2P7 627 aaPredicted RBP2.85□□□□□ -1.95
CLK1-213ENST00000492793 ATP6V0A2Q9Y487 856 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 CLSPNQ9HAW4 1339 aa2.85□□□□□ -1.95
CLK1-213ENST00000492793 IGHV7-81A0A0B4J1V7 117 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 A0A1W2PNV4 684 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 METTL21EPA6NDL7 271 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 RS1O15537 224 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 MTX2O75431 263 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 RHOBTB1O94844 696 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 SLITRK3O94933 977 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 LALBAP00709 142 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 SEMG1P04279 462 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 HSMCR30P0CW71 290 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 CYP2B6P20813 491 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 HNF1AP20823 631 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 HMGB2P26583 209 aaKnown RBP2.84□□□□□ -1.95
CLK1-213ENST00000492793 FGF9P31371 208 aaPredicted RBP2.84□□□□□ -1.95
CLK1-213ENST00000492793 ORC2Q13416 577 aaPredicted RBP2.84□□□□□ -1.95
CLK1-213ENST00000492793 MESDQ14696 234 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 CCDC152Q4G0S7 254 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 SPATA46Q5T0L3 261 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 TPGS2Q68CL5 300 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 FAM71F2Q6NXP2 309 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 SYT10Q6XYQ8 523 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 SCARA5Q6ZMJ2 495 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 PPP1R27Q86WC6 154 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 TMEM123Q8N131 208 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 CLEC4FQ8N1N0 589 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 ANKFN1Q8N957 763 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 ZNF540Q8NDQ6 660 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 BBS1Q8NFJ9 593 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 FAM3CQ92520 227 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 DCUN1D4Q92564 292 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 MCHR1Q99705 422 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 POLR2J2Q9GZM3 115 aaKnown RBP2.84□□□□□ -1.95
CLK1-213ENST00000492793 POLR2J3Q9H1A7 115 aaKnown RBP2.84□□□□□ -1.95
CLK1-213ENST00000492793 NARFLQ9H6Q4 476 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 RAB18Q9NP72 206 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 MARCH5Q9NX47 278 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 TREM2Q9NZC2 230 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 IL36GQ9NZH8 169 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 TMEM9Q9P0T7 183 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 MRPS7Q9Y2R9 242 aaKnown RBP2.84□□□□□ -1.95
CLK1-213ENST00000492793 KIF25-AS1Q9Y6Z4 181 aa2.84□□□□□ -1.95
CLK1-213ENST00000492793 IGHV1OR15-1A0A075B7D0 117 aa2.83□□□□□ -1.96
CLK1-213ENST00000492793 MBLAC1A4D2B0 266 aaPredicted RBP2.83□□□□□ -1.96
CLK1-213ENST00000492793 K7N7A8 449 aa2.83□□□□□ -1.96
CLK1-213ENST00000492793 RGS16O15492 202 aaPredicted RBP2.83□□□□□ -1.96
CLK1-213ENST00000492793 POLR2DO15514 142 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms