RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 ZNRF4Q8WWF5 429 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 ANKRD19PQ9H560 264 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 KLHL1Q9NR64 748 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 A0A0B4J293 547 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 DAPL1A0PJW8 107 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 TMEM221A6NGB7 291 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 STK25O00506 426 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 PAHP00439 452 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 IGHA1P01876 353 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 THBS1P07996 1170 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 MYF5P13349 255 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 BMP8BP34820 402 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 RABIFP47224 123 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 CCR4P51679 360 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 MRPS21P82921 87 aaKnown RBP11.48□□□□□ -0.57
HMGN1-220ENST00000492280 IDNKQ5T6J7 187 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 ARMC6Q6NXE6 501 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 BMP8AQ7Z5Y6 402 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 OAFQ86UD1 273 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 PRSS58Q8IYP2 241 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 C19orf47Q8N9M1 422 aaKnown RBP11.48□□□□□ -0.57
HMGN1-220ENST00000492280 RCBTB1Q8NDN9 531 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 OR4C3Q8NH37 302 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 RIT1Q92963 219 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 MSLNLQ96KJ4 702 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 ATF6BQ99941 703 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 FBRSQ9HAH7 460 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 DNAJB12Q9NXW2 375 aaKnown RBP11.48□□□□□ -0.57
HMGN1-220ENST00000492280 ZMIZ1Q9ULJ6 1067 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 GSTK1Q9Y2Q3 226 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 MED31Q9Y3C7 131 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 COL4A2P08572 1712 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 A0A087WV48 116 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 A0A1W2PRG6 482 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 PRR23D1E9PI22 279 aaPredicted RBP11.48□□□□□ -0.57
HMGN1-220ENST00000492280 PRAMEF26H0Y7S4 382 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 FOXS1O43638 330 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 AGR2O95994 175 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 IFNA16P05015 189 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 PRR23D2P0DMB1 279 aaPredicted RBP11.48□□□□□ -0.57
HMGN1-220ENST00000492280 SLC2A2P11168 524 aaPredicted RBP11.48□□□□□ -0.57
HMGN1-220ENST00000492280 S1PR1P21453 382 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 TP53I3Q53FA7 332 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 ZNF362Q5T0B9 420 aaPredicted RBP11.48□□□□□ -0.57
HMGN1-220ENST00000492280 AGAP6Q5VW22 663 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 MCATQ8IVS2 390 aaKnown RBP11.48□□□□□ -0.57
HMGN1-220ENST00000492280 SAMD14Q8IZD0 417 aaPredicted RBP11.48□□□□□ -0.57
HMGN1-220ENST00000492280 ACBD7Q8N6N7 88 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 OR5J2Q8NH18 312 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 UBASH3BQ8TF42 649 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 CTHRC1Q96CG8 243 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 MMABQ96EY8 250 aaPredicted RBP11.48□□□□□ -0.57
HMGN1-220ENST00000492280 C4orf36Q96KX1 117 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 AGAP4Q96P64 663 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 TGM7Q96PF1 710 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 YIPF2Q9BWQ6 316 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 TEX12Q9BXU0 123 aa11.48□□□□□ -0.57
HMGN1-220ENST00000492280 FER1L5A0AVI2 2057 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 A0A0B4J2E0 115 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 A0A1B0GX12 115 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 H3BSH0 61 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 GTPBP1O00178 669 aaKnown RBP11.47□□□□□ -0.57
HMGN1-220ENST00000492280 POLR1CO15160 346 aaPredicted RBP11.47□□□□□ -0.57
HMGN1-220ENST00000492280 RNF13O43567 381 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 DYRK3O43781 588 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 MAGEA8P43361 318 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 RAB38P57729 211 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 YPEL5P62699 121 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 GPR50Q13585 617 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.47□□□□□ -0.57
HMGN1-220ENST00000492280 MEPCEQ7L2J0 689 aaKnown RBP11.47□□□□□ -0.57
HMGN1-220ENST00000492280 CLDN22Q8N7P3 220 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 OR52E2Q8NGJ4 325 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 BRIX1Q8TDN6 353 aaKnown RBP11.47□□□□□ -0.57
HMGN1-220ENST00000492280 ASB12Q8WXK4 309 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 TMCO6Q96DC7 493 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 RBM18Q96H35 190 aaKnown RBP11.47□□□□□ -0.57
HMGN1-220ENST00000492280 DDX28Q9NUL7 540 aaKnown RBP11.47□□□□□ -0.57
HMGN1-220ENST00000492280 SOHLH2Q9NX45 425 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 POMT2Q9UKY4 750 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 CCDC182A6NF36 153 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 MCIDASD6RGH6 385 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 PLA2G10O15496 165 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 WNT1P04628 370 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 ACAA2P42765 397 aaKnown RBP11.47□□□□□ -0.57
HMGN1-220ENST00000492280 MAGEB1P43366 347 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 HTR3AP46098 478 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 GAS6Q14393 721 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 DEFB133Q30KQ1 61 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 ATAD3CQ5T2N8 411 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 GARNL3Q5VVW2 1013 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 PAMR1Q6UXH9 720 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 PRR22Q8IZ63 422 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 ZNF655Q8N720 491 aaPredicted RBP11.47□□□□□ -0.57
HMGN1-220ENST00000492280 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.47□□□□□ -0.57
HMGN1-220ENST00000492280 ITPKCQ96DU7 683 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 WDFY2Q96P53 400 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 ERMAPQ96PL5 475 aaPredicted RBP11.47□□□□□ -0.57
HMGN1-220ENST00000492280 TEAD3Q99594 435 aa11.47□□□□□ -0.57
HMGN1-220ENST00000492280 ZNF576Q9H609 170 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms