RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 CNOT9Q92600 299 aaKnown RBP22.08■■□□□ 1.13
UPF3A-209ENST00000492270 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.08■■□□□ 1.13
UPF3A-209ENST00000492270 ZNF446Q9NWS9 450 aa22.08■■□□□ 1.13
UPF3A-209ENST00000492270 CCDC167Q9P0B6 97 aa22.08■■□□□ 1.13
UPF3A-209ENST00000492270 PCDHB14Q9Y5E9 798 aa22.08■■□□□ 1.13
UPF3A-209ENST00000492270 SPG11Q96JI7 2443 aa22.08■■□□□ 1.12
UPF3A-209ENST00000492270 A0A1W2PNR3 127 aa22.07■■□□□ 1.12
UPF3A-209ENST00000492270 AGAP5A6NIR3 686 aa22.07■■□□□ 1.12
UPF3A-209ENST00000492270 A6NNC1 897 aa22.07■■□□□ 1.12
UPF3A-209ENST00000492270 NR5A2O00482 541 aa22.07■■□□□ 1.12
UPF3A-209ENST00000492270 PLGP00747 810 aaPredicted RBP22.07■■□□□ 1.12
UPF3A-209ENST00000492270 PGCP20142 388 aa22.07■■□□□ 1.12
UPF3A-209ENST00000492270 RPS4Y1P22090 263 aaKnown RBP22.07■■□□□ 1.12
UPF3A-209ENST00000492270 FAM27E3Q08E93 113 aa22.07■■□□□ 1.12
UPF3A-209ENST00000492270 BLOC1S3Q6QNY0 202 aa22.07■■□□□ 1.12
UPF3A-209ENST00000492270 ZNF610Q8N9Z0 462 aa22.07■■□□□ 1.12
UPF3A-209ENST00000492270 WDR60Q8WVS4 1066 aa22.07■■□□□ 1.12
UPF3A-209ENST00000492270 GMPPAQ96IJ6 420 aaPredicted RBP22.07■■□□□ 1.12
UPF3A-209ENST00000492270 DNAJB12Q9NXW2 375 aaKnown RBP22.07■■□□□ 1.12
UPF3A-209ENST00000492270 P2RX2Q9UBL9 471 aa22.07■■□□□ 1.12
UPF3A-209ENST00000492270 PROCRQ9UNN8 238 aa22.07■■□□□ 1.12
UPF3A-209ENST00000492270 CCDC168Q8NDH2 2452 aa22.07■■□□□ 1.12
UPF3A-209ENST00000492270 FREM1Q5H8C1 2179 aa22.06■■□□□ 1.12
UPF3A-209ENST00000492270 FAM221AA4D161 298 aa22.06■■□□□ 1.12
UPF3A-209ENST00000492270 GJE1A6NN92 205 aa22.06■■□□□ 1.12
UPF3A-209ENST00000492270 SS18L1O75177 396 aaPredicted RBP22.06■■□□□ 1.12
UPF3A-209ENST00000492270 BCHEP06276 602 aa22.06■■□□□ 1.12
UPF3A-209ENST00000492270 CD8BP10966 210 aa22.06■■□□□ 1.12
UPF3A-209ENST00000492270 EPXP11678 715 aa22.06■■□□□ 1.12
UPF3A-209ENST00000492270 DSTNP60981 165 aa22.06■■□□□ 1.12
UPF3A-209ENST00000492270 MERTKQ12866 999 aa22.06■■□□□ 1.12
UPF3A-209ENST00000492270 RPS26P11Q5JNZ5 115 aaPredicted RBP22.06■■□□□ 1.12
UPF3A-209ENST00000492270 PLEKHM3Q6ZWE6 761 aa22.06■■□□□ 1.12
UPF3A-209ENST00000492270 POLDIP3Q9BY77 421 aaKnown RBP22.06■■□□□ 1.12
UPF3A-209ENST00000492270 SLC52A3Q9NQ40 469 aa22.06■■□□□ 1.12
UPF3A-209ENST00000492270 ACER3Q9NUN7 267 aa22.06■■□□□ 1.12
UPF3A-209ENST00000492270 EMC9Q9Y3B6 208 aa22.06■■□□□ 1.12
UPF3A-209ENST00000492270 AKAP6Q13023 2319 aa22.06■■□□□ 1.12
UPF3A-209ENST00000492270 AP3D1O14617 1153 aa22.05■■□□□ 1.12
UPF3A-209ENST00000492270 EDF1O60869 148 aaKnown RBP22.05■■□□□ 1.12
UPF3A-209ENST00000492270 CCKARP32238 428 aa22.05■■□□□ 1.12
UPF3A-209ENST00000492270 CD79BP40259 229 aa22.05■■□□□ 1.12
UPF3A-209ENST00000492270 CTBP2P56545 445 aa22.05■■□□□ 1.12
UPF3A-209ENST00000492270 PAGE3Q5JUK9 113 aa22.05■■□□□ 1.12
UPF3A-209ENST00000492270 C3orf33Q6P1S2 294 aa22.05■■□□□ 1.12
UPF3A-209ENST00000492270 MSRB3Q8IXL7 192 aa22.05■■□□□ 1.12
UPF3A-209ENST00000492270 ARFGAP2Q8N6H7 521 aa22.05■■□□□ 1.12
UPF3A-209ENST00000492270 OR6K3Q8NGY3 331 aa22.05■■□□□ 1.12
UPF3A-209ENST00000492270 ZNF563Q8TA94 476 aa22.05■■□□□ 1.12
UPF3A-209ENST00000492270 RNF128Q8TEB7 428 aa22.05■■□□□ 1.12
UPF3A-209ENST00000492270 ABHD3Q8WU67 409 aa22.05■■□□□ 1.12
UPF3A-209ENST00000492270 TMEM234Q8WY98 164 aa22.05■■□□□ 1.12
UPF3A-209ENST00000492270 CPNE4Q96A23 557 aaPredicted RBP22.05■■□□□ 1.12
UPF3A-209ENST00000492270 SPDL1Q96EA4 605 aa22.05■■□□□ 1.12
UPF3A-209ENST00000492270 MTHFD2LQ9H903 347 aaPredicted RBP22.05■■□□□ 1.12
UPF3A-209ENST00000492270 NPHS2Q9NP85 383 aa22.05■■□□□ 1.12
UPF3A-209ENST00000492270 EXOSC3Q9NQT5 275 aaKnown RBP22.05■■□□□ 1.12
UPF3A-209ENST00000492270 RASSF1Q9NS23 344 aa22.05■■□□□ 1.12
UPF3A-209ENST00000492270 SLC25A37Q9NYZ2 338 aa22.05■■□□□ 1.12
UPF3A-209ENST00000492270 SLAMF8Q9P0V8 285 aa22.05■■□□□ 1.12
UPF3A-209ENST00000492270 ITGB1BP2Q9UKP3 347 aa22.05■■□□□ 1.12
UPF3A-209ENST00000492270 DSPPQ9NZW4 1301 aa22.05■■□□□ 1.12
UPF3A-209ENST00000492270 A0A096LPI6 279 aa22.04■■□□□ 1.12
UPF3A-209ENST00000492270 IGHV3-15A0A0B4J1V0 119 aa22.04■■□□□ 1.12
UPF3A-209ENST00000492270 SH3D21A4FU49 640 aa22.04■■□□□ 1.12
UPF3A-209ENST00000492270 ENO4A6NNW6 628 aa22.04■■□□□ 1.12
UPF3A-209ENST00000492270 NUDT7P0C024 238 aa22.04■■□□□ 1.12
UPF3A-209ENST00000492270 TFPTP0C1Z6 253 aa22.04■■□□□ 1.12
UPF3A-209ENST00000492270 IL7RP16871 459 aa22.04■■□□□ 1.12
UPF3A-209ENST00000492270 SLC7A1P30825 629 aa22.04■■□□□ 1.12
UPF3A-209ENST00000492270 MAGEA8P43361 318 aa22.04■■□□□ 1.12
UPF3A-209ENST00000492270 DAZAP2Q15038 168 aaPredicted RBP22.04■■□□□ 1.12
UPF3A-209ENST00000492270 AGKQ53H12 422 aa22.04■■□□□ 1.12
UPF3A-209ENST00000492270 MRPL2Q5T653 305 aaKnown RBP22.04■■□□□ 1.12
UPF3A-209ENST00000492270 SLC38A5Q8WUX1 472 aa22.04■■□□□ 1.12
UPF3A-209ENST00000492270 CLEC4MQ9H2X3 399 aaPredicted RBP22.04■■□□□ 1.12
UPF3A-209ENST00000492270 CTPS2Q9NRF8 586 aa22.04■■□□□ 1.12
UPF3A-209ENST00000492270 DCTN4Q9UJW0 460 aa22.04■■□□□ 1.12
UPF3A-209ENST00000492270 ABCA4P78363 2273 aa22.03■■□□□ 1.12
UPF3A-209ENST00000492270 CLIC1O00299 241 aa22.03■■□□□ 1.12
UPF3A-209ENST00000492270 POU2F1P14859 743 aa22.03■■□□□ 1.12
UPF3A-209ENST00000492270 KLK2P20151 261 aa22.03■■□□□ 1.12
UPF3A-209ENST00000492270 AGTR1P30556 359 aa22.03■■□□□ 1.12
UPF3A-209ENST00000492270 KCNJ5P48544 419 aa22.03■■□□□ 1.12
UPF3A-209ENST00000492270 ATP4BP51164 291 aa22.03■■□□□ 1.12
UPF3A-209ENST00000492270 SQLEQ14534 574 aa22.03■■□□□ 1.12
UPF3A-209ENST00000492270 RGNQ15493 299 aa22.03■■□□□ 1.12
UPF3A-209ENST00000492270 ZNF836Q6ZNA1 936 aa22.03■■□□□ 1.12
UPF3A-209ENST00000492270 FCRLAQ7L513 359 aa22.03■■□□□ 1.12
UPF3A-209ENST00000492270 VRK2Q86Y07 508 aa22.03■■□□□ 1.12
UPF3A-209ENST00000492270 TMEM19Q96HH6 336 aa22.03■■□□□ 1.12
UPF3A-209ENST00000492270 OR5B2Q96R09 309 aa22.03■■□□□ 1.12
UPF3A-209ENST00000492270 CCDC106Q9BWC9 280 aa22.03■■□□□ 1.12
UPF3A-209ENST00000492270 TIGARQ9NQ88 270 aa22.03■■□□□ 1.12
UPF3A-209ENST00000492270 UQCRHLA0A096LP55 91 aa22.02■■□□□ 1.12
UPF3A-209ENST00000492270 DBIP07108 87 aaKnown RBP22.02■■□□□ 1.12
UPF3A-209ENST00000492270 ENPP1P22413 925 aa22.02■■□□□ 1.12
UPF3A-209ENST00000492270 IDH2P48735 452 aaKnown RBP22.02■■□□□ 1.12
UPF3A-209ENST00000492270 CRISP3P54108 245 aa22.02■■□□□ 1.12
UPF3A-209ENST00000492270 EXOC3L2Q2M3D2 409 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms