RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	QPRT	Q15274	297 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	TSC22D1	Q15714	1073 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	TAB1	Q15750	504 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	SLC25A53	Q5H9E4	307 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	ADAM5	Q6NVV9	412 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	C3orf33	Q6P1S2	294 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	ZNF619	Q8N2I2	560 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	KRTCAP2	Q8N6L1	136 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	OR5D16	Q8NGK9	328 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	OR5W2	Q8NH69	310 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	OR5AK3P	Q8NH89	298 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	MGARP	Q8TDB4	240 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	HSD17B8	Q92506	261 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	FBXW5	Q969U6	566 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	TUBGCP3	Q96CW5	907 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	PAIP2	Q9BPZ3	127 aa	Known RBP	13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	DUSP26	Q9BV47	211 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	POTEKP	Q9BYX7	375 aa		13.63	□□□□□ -0.23
MRPL55-231	ENST00000492170	IGHV3-15	A0A0B4J1V0	119 aa		13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170		A0A1W2PNR3	127 aa		13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	DUXA	A6NLW8	204 aa		13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	INAFM1	C9JVW0	142 aa		13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	KLF11	O14901	512 aa		13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	NTN1	O95631	604 aa		13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	ADA	P00813	363 aa		13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	ENPP1	P22413	925 aa		13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	RPL14	P50914	215 aa	Known RBP	13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	HBA1	P69905	142 aa		13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	MAD2L1	Q13257	205 aa	Predicted RBP	13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	ITGAD	Q13349	1161 aa		13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	NCMAP	Q5T1S8	102 aa		13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	PDZK1	Q5T2W1	519 aa		13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	RIMKLA	Q8IXN7	391 aa		13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	TRMT61A	Q96FX7	289 aa	Known RBP	13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	SDF2	Q99470	211 aa		13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	PSD2	Q9BQI7	771 aa		13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	NMUR2	Q9GZQ4	415 aa		13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	BCO1	Q9HAY6	547 aa		13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	ZNF446	Q9NWS9	450 aa		13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	PRR14L	Q5THK1	2151 aa		13.62	□□□□□ -0.23
MRPL55-231	ENST00000492170	SERINC4	A6NH21	518 aa		13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170	ETV2	O00321	342 aa	Predicted RBP	13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170	STX11	O75558	287 aa		13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170	CYP7B1	O75881	506 aa		13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170	G6PD	P11413	515 aa		13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170	MATN1	P21941	496 aa		13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170	C21orf58	P58505	322 aa		13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170	RPS26	P62854	115 aa	Known RBP	13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170	VEZF1	Q14119	521 aa		13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170	ETFDH	Q16134	617 aa		13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170	PGS1	Q32NB8	556 aa		13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170	ATG16L1	Q676U5	607 aa		13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170		Q6ZT83	130 aa		13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170	BHLHA15	Q7RTS1	189 aa	Predicted RBP	13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170	PRIMA1	Q86XR5	153 aa		13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170	GTPBP3	Q969Y2	492 aa	Known RBP	13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170	SLC35G5	Q96KT7	338 aa		13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170	OR5B2	Q96R09	309 aa		13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170	LAT2	Q9GZY6	243 aa		13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170	THAP1	Q9NVV9	213 aa		13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170	NOP53	Q9NZM5	478 aa	Known RBP	13.61	□□□□□ -0.23
MRPL55-231	ENST00000492170	RNF103-CHMP3	A0A140T963	221 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170		A0A1W2PP18	115 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	ZNF814	B7Z6K7	855 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	CYTIP	O60759	359 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	FES	P07332	822 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	OR3A2	P47893	321 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	CLDN8	P56748	225 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	RASGEF1B	Q0VAM2	473 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	SKP2	Q13309	424 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	TNK1	Q13470	666 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	GPR68	Q15743	365 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	STK11	Q15831	433 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	PDCD2	Q16342	344 aa	Predicted RBP	13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	CLEC12B	Q2HXU8	276 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	SMU1	Q2TAY7	513 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	ZNF672	Q499Z4	452 aa	Predicted RBP	13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	TIGD2	Q4W5G0	525 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	C16orf62	Q7Z3J2	963 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	C6orf120	Q7Z4R8	191 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	LRRC34	Q8IZ02	419 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	GOLGA6L1	Q8N7Z2	621 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	SMAP2	Q8WU79	429 aa	Predicted RBP	13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	TMEM234	Q8WY98	164 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	ST8SIA1	Q92185	356 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	ZNF524	Q96C55	264 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	THUMPD3	Q9BV44	507 aa	Known RBP	13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	MANSC1	Q9H8J5	431 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	SERINC1	Q9NRX5	453 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	EXD2	Q9NVH0	621 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	ASIC5	Q9NY37	505 aa		13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	NUP214	P35658	2090 aa	Predicted RBP	13.6	□□□□□ -0.23
MRPL55-231	ENST00000492170	ZNF724	A8MTY0	619 aa		13.59	□□□□□ -0.23
MRPL55-231	ENST00000492170	OVOL3	O00110	214 aa		13.59	□□□□□ -0.23
MRPL55-231	ENST00000492170	RNASET2	O00584	256 aa	Known RBP	13.59	□□□□□ -0.23
MRPL55-231	ENST00000492170	SMAD9	O15198	467 aa	Known RBP	13.59	□□□□□ -0.23
MRPL55-231	ENST00000492170	LYZL6	O75951	148 aa		13.59	□□□□□ -0.23
MRPL55-231	ENST00000492170	H6PD	O95479	791 aa		13.59	□□□□□ -0.23
MRPL55-231	ENST00000492170	CSTA	P01040	98 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms