RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 PRPS1L1P21108 318 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 IGHV1-2P23083 117 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 ME2P23368 584 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 MAPK1P28482 360 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 PGM1P36871 562 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 WDR4P57081 412 aaKnown RBP7.89□□□□□ -1.15
HDAC3-211ENST00000491581 CHRNEQ04844 493 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 BSPH1Q075Z2 132 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 BST1Q10588 318 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 MERTKQ12866 999 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 FAPQ12884 760 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 TNK1Q13470 666 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 MAPK11Q15759 364 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 STK11Q15831 433 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 ARHGAP11BQ3KRB8 267 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 FAM174BQ3ZCQ3 159 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 GTDC1Q4AE62 458 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 CEP85LQ5SZL2 805 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 SFRP5Q5T4F7 317 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 FRRS1Q6ZNA5 592 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 PLEKHM3Q6ZWE6 761 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 MAVSQ7Z434 540 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 OR5W2Q8NH69 310 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 SFXN5Q8TD22 340 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 MDFIQ99750 246 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 TMEM204Q9BSN7 226 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 C1QTNF6Q9BXI9 259 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 DPY30Q9C005 99 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 KCNK9Q9NPC2 374 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 NOP53Q9NZM5 478 aaKnown RBP7.89□□□□□ -1.15
HDAC3-211ENST00000491581 MAGED1Q9Y5V3 778 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-211ENST00000491581 CUBNO60494 3623 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 RGS16O15492 202 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-211ENST00000491581 CSTAP01040 98 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 SERPINE1P05121 402 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 HEXAP06865 529 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 CHRM4P08173 479 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 EPHA3P29320 983 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 DIO1P49895 249 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 C21orf58P58505 322 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 EEF1A1P68104 462 aaKnown RBP7.88□□□□□ -1.15
HDAC3-211ENST00000491581 LGALS3BPQ08380 585 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 RASGEF1BQ0VAM2 473 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 FGFBP1Q14512 234 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 ZNF141Q15928 474 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 LSM12Q3MHD2 195 aaKnown RBP7.88□□□□□ -1.15
HDAC3-211ENST00000491581 GPAT3Q53EU6 434 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 BEX5Q5H9J7 111 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 RPS26P11Q5JNZ5 115 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-211ENST00000491581 TMEM201Q5SNT2 666 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 EEF1A1P5Q5VTE0 462 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 SHEQ5VZ18 495 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 SAXO2Q658L1 398 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 HEPHL1Q6MZM0 1159 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 WDR93Q6P2C0 686 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 BEND4Q6ZU67 534 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 C16orf62Q7Z3J2 963 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 BIVMQ86UB2 503 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 RNF130Q86XS8 419 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 ROPN1LQ96C74 230 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 SLC35A5Q9BS91 424 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 RSPO3Q9BXY4 272 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-211ENST00000491581 ROPN1BQ9BZX4 212 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-211ENST00000491581 ZNF350Q9GZX5 532 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 ROPN1Q9HAT0 212 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-211ENST00000491581 ATAD3AQ9NVI7 634 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 RLIMQ9NVW2 624 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 RAP2CQ9Y3L5 183 aa7.88□□□□□ -1.15
HDAC3-211ENST00000491581 GPC6Q9Y625 555 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-211ENST00000491581 FN1P02751 2386 aaKnown RBP7.88□□□□□ -1.15
HDAC3-211ENST00000491581 ZNF716A6NP11 495 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 RNF223E7ERA6 249 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 HMGN4O00479 90 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 RNASET2O00584 256 aaKnown RBP7.87□□□□□ -1.15
HDAC3-211ENST00000491581 HS3ST1O14792 307 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 KIAA0513O60268 411 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 STX11O75558 287 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 RAD51DO75771 328 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 PRKD3O94806 890 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 YES1P07947 543 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 GKN3PP0CG01 181 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 TFPIP10646 304 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 IMPDH2P12268 514 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 FOSL1P15407 271 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 PSMB1P20618 241 aaKnown RBP7.87□□□□□ -1.15
HDAC3-211ENST00000491581 IL32P24001 234 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 SLC7A1P30825 629 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 ACVR1BP36896 505 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 IDH2P48735 452 aaKnown RBP7.87□□□□□ -1.15
HDAC3-211ENST00000491581 RPL14P50914 215 aaKnown RBP7.87□□□□□ -1.15
HDAC3-211ENST00000491581 SLC25A3Q00325 362 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 BNIP2Q12982 314 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 SELENBP1Q13228 472 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 STX3Q13277 289 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 CBFBQ13951 182 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 CASP8Q14790 479 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 PGGHGQ32M88 737 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 SLC9B1Q4ZJI4 515 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 TNFAIP8L3Q5GJ75 292 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 SLC25A53Q5H9E4 307 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms