RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 PSMB1P20618 241 aaKnown RBP7.36□□□□□ -1.23
LSM2-213ENST00000491421 FPR1P21462 350 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 ENPP1P22413 925 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 NR1H2P55055 460 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 SESN3P58005 492 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 RAC3P60763 192 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 UFM1P61960 85 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 MERTKQ12866 999 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 ACKR1Q16570 336 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 TIGD2Q4W5G0 525 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 BEX5Q5H9J7 111 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 TYW3Q6IPR3 259 aaKnown RBP7.36□□□□□ -1.23
LSM2-213ENST00000491421 ALKBH2Q6NS38 261 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 TFAP2EQ6VUC0 442 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 C20orf204Q6ZNR8 217 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 NUFIP2Q7Z417 695 aaKnown RBP7.36□□□□□ -1.23
LSM2-213ENST00000491421 SPATA19Q7Z5L4 167 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 WFDC8Q8IUA0 241 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 P3H2Q8IVL5 708 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 TUSC5Q8IXB3 177 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 SLC43A2Q8N370 569 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 TRIML2Q8N7C3 387 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 STEAP2Q8NFT2 490 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 OIT3Q8WWZ8 545 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 TMEM234Q8WY98 164 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 ST8SIA1Q92185 356 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 PIGTQ969N2 578 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 ROPN1LQ96C74 230 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 TEX37Q96LM6 180 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 CCDC115Q96NT0 180 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 OR5B2Q96R09 309 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 PANX1Q96RD7 426 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 ZBTB18Q99592 522 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 CCL19Q99731 98 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 PIP5K1AQ99755 562 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 TACO1Q9BSH4 297 aaKnown RBP7.36□□□□□ -1.23
LSM2-213ENST00000491421 OR10A4Q9H209 315 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 SERINC1Q9NRX5 453 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 AIG1Q9NVV5 245 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 THAP1Q9NVV9 213 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 KLHL9Q9P2J3 617 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 BTNL2Q9UIR0 455 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 SLC35A3Q9Y2D2 325 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 GPR52Q9Y2T5 361 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 ABCA4P78363 2273 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 VPS13CQ709C8 3753 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 MED12LQ86YW9 2145 aa7.36□□□□□ -1.23
LSM2-213ENST00000491421 FLNAP21333 2647 aaKnown RBP7.35□□□□□ -1.23
LSM2-213ENST00000491421 ZNF469Q96JG9 3925 aaPredicted RBP7.35□□□□□ -1.23
LSM2-213ENST00000491421 GOLGA8QA0A0J9YX86 632 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 GOLGA8OA6NCC3 632 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 CCDC154A6NI56 674 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 GOLGA8NF8WBI6 632 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 HMGN4O00479 90 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 SMAD9O15198 467 aaKnown RBP7.35□□□□□ -1.23
LSM2-213ENST00000491421 HDAC3O15379 428 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 KLF4O43474 513 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 DNAJA2O60884 412 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 SNNO75324 88 aaPredicted RBP7.35□□□□□ -1.23
LSM2-213ENST00000491421 GCM2O75603 506 aaPredicted RBP7.35□□□□□ -1.23
LSM2-213ENST00000491421 PGRP06401 933 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 KITP10721 976 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 IL32P24001 234 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 LOXP28300 417 aaPredicted RBP7.35□□□□□ -1.23
LSM2-213ENST00000491421 EPHA3P29320 983 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 RYKP34925 604 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 ANXA11P50995 505 aaKnown RBP7.35□□□□□ -1.23
LSM2-213ENST00000491421 WDR4P57081 412 aaKnown RBP7.35□□□□□ -1.23
LSM2-213ENST00000491421 LRRC74AQ0VAA2 488 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 FUT5Q11128 374 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 MAPK14Q16539 360 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 GPAT3Q53EU6 434 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 SYT14P1Q58G82 188 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 Q5PR19 223 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 SHEQ5VZ18 495 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 ATG16L1Q676U5 607 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 NXNQ6DKJ4 435 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 FRRS1Q6ZNA5 592 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 ZNF704Q6ZNC4 412 aaPredicted RBP7.35□□□□□ -1.23
LSM2-213ENST00000491421 PLEKHM3Q6ZWE6 761 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 HMGN2P46Q86SG4 172 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 RNF130Q86XS8 419 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 KRTAP1-3Q8IUG1 177 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 GABRG1Q8N1C3 465 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 LRRC75A-AS1Q8N1F1 130 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 ZNF619Q8N2I2 560 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 FAM71CQ8NEG0 241 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 ZNF563Q8TA94 476 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 SLC25A43Q8WUT9 341 aaPredicted RBP7.35□□□□□ -1.23
LSM2-213ENST00000491421 KISS1RQ969F8 398 aaPredicted RBP7.35□□□□□ -1.23
LSM2-213ENST00000491421 S100PBPQ96BU1 408 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 PLPPR2Q96GM1 343 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 OR52E6Q96RD3 313 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 PSD2Q9BQI7 771 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 HDHD5Q9BXW7 423 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 SAP130Q9H0E3 1048 aa7.35□□□□□ -1.23
LSM2-213ENST00000491421 GSX1Q9H4S2 264 aaPredicted RBP7.35□□□□□ -1.23
LSM2-213ENST00000491421 WDR55Q9H6Y2 383 aaPredicted RBP7.35□□□□□ -1.23
LSM2-213ENST00000491421 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.35□□□□□ -1.23
LSM2-213ENST00000491421 ACER3Q9NUN7 267 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms