RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 ADGRG7Q96K78 797 aa7.56□□□□□ -1.2
PCOLCE-209ENST00000490909 HOPXQ9BPY8 73 aaPredicted RBP7.56□□□□□ -1.2
PCOLCE-209ENST00000490909 SLC35A5Q9BS91 424 aa7.56□□□□□ -1.2
PCOLCE-209ENST00000490909 REPIN1Q9BWE0 567 aaKnown RBP7.56□□□□□ -1.2
PCOLCE-209ENST00000490909 ACTRT3Q9BYD9 372 aa7.56□□□□□ -1.2
PCOLCE-209ENST00000490909 PAIP1Q9H074 479 aaKnown RBP7.56□□□□□ -1.2
PCOLCE-209ENST00000490909 DSN1Q9H410 356 aa7.56□□□□□ -1.2
PCOLCE-209ENST00000490909 PIGUQ9H490 435 aa7.56□□□□□ -1.2
PCOLCE-209ENST00000490909 Q9N2J8 555 aa7.56□□□□□ -1.2
PCOLCE-209ENST00000490909 EXD2Q9NVH0 621 aa7.56□□□□□ -1.2
PCOLCE-209ENST00000490909 ZNF226Q9NYT6 803 aa7.56□□□□□ -1.2
PCOLCE-209ENST00000490909 PPP4R1LQ9P1A2 415 aa7.56□□□□□ -1.2
PCOLCE-209ENST00000490909 ARMCX1Q9P291 453 aa7.56□□□□□ -1.2
PCOLCE-209ENST00000490909 TAGLN3Q9UI15 199 aa7.56□□□□□ -1.2
PCOLCE-209ENST00000490909 CLEC4AQ9UMR7 237 aa7.56□□□□□ -1.2
PCOLCE-209ENST00000490909 MRPS18CQ9Y3D5 142 aaKnown RBP7.56□□□□□ -1.2
PCOLCE-209ENST00000490909 ZNF337Q9Y3M9 751 aa7.56□□□□□ -1.2
PCOLCE-209ENST00000490909 SNX8Q9Y5X2 465 aa7.56□□□□□ -1.2
PCOLCE-209ENST00000490909 YLPM1P49750 1951 aaKnown RBP7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 LOC100653049A0A140TA62 436 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 C16orf97H3BN30 126 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 CLIC1O00299 241 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 MRASO14807 208 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 HNRNPCL1O60812 293 aaKnown RBP7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 KRT34O76011 436 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 NKX2-2O95096 273 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 IGKV1D-16P01601 117 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 HMGN2P05204 90 aaKnown RBP7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 ALOX5P09917 674 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 PEPDP12955 493 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 HK1P19367 917 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 FPR1P21462 350 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 SOAT1P35610 550 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 KRT20P35900 424 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 CHI3L1P36222 383 aaPredicted RBP7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 KHKP50053 298 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 PNLIPRP2P54317 469 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 PRKAG1P54619 331 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 SF3A3Q12874 501 aaKnown RBP eCLIP7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 NFYCQ13952 458 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 GNA13Q14344 377 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 GANABQ14697 944 aaKnown RBP7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 SPATS1Q496A3 300 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 PAGE3Q5JUK9 113 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 EXOSC6Q5RKV6 272 aaKnown RBP7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 ATAD3BQ5T9A4 648 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 AP1ARQ63HQ0 302 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 SLC2A7Q6PXP3 512 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 SEZ6L2Q6UXD5 910 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 APOOLQ6UXV4 268 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 STAC2Q6ZMT1 411 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 ZNF704Q6ZNC4 412 aaPredicted RBP7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 TRPM8Q7Z2W7 1104 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 ATG4DQ86TL0 474 aaPredicted RBP7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 ANKRD46Q86W74 232 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 SNX32Q86XE0 403 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 MAPK1IP1LQ8NDC0 245 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 OR8J3Q8NGG0 315 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 ADAMTS15Q8TE58 950 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 ZFP90Q8TF47 636 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 NANOS1Q8WY41 292 aaKnown RBP7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 GIMAP5Q96F15 307 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 CGREF1Q99674 301 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 TMEM204Q9BSN7 226 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 BDH2Q9BUT1 245 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 SPATA9Q9BWV2 254 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 TPT1P8Q9HAU6 139 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 POLE3Q9NRF9 147 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 ZNF701Q9NV72 531 aaPredicted RBP7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 GPATCH2Q9NW75 528 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 ELOVL5Q9NYP7 299 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 MED11Q9P086 117 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 ABCG2Q9UNQ0 655 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 LIPT1Q9Y234 373 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 ZNF175Q9Y473 711 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 PCDHB14Q9Y5E9 798 aa7.55□□□□□ -1.2
PCOLCE-209ENST00000490909 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 IGLV3-32A0A0A0MS00 114 aa7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 TRBV5-3A0A0A0MS03 114 aa7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 TMEM247A6NEH6 219 aa7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 C9JVG2 144 aa7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 FBP2O00757 339 aa7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 GMFGO60234 142 aa7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 DNAJA2O60884 412 aa7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 TNFRSF21O75509 655 aa7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 ATP5HO75947 161 aa7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 BMP2P12643 396 aa7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 HOXB9P17482 250 aaPredicted RBP7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 GPX2P18283 190 aa7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 MATN1P21941 496 aa7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 CALB2P22676 271 aa7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 KCNJ5P48544 419 aa7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 EEF1A1P68104 462 aaKnown RBP7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 LASP1Q14847 261 aaKnown RBP7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 DECR1Q16698 335 aa7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 EXOC3L2Q2M3D2 409 aa7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 RUNDC3AQ59EK9 446 aa7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 BEX5Q5H9J7 111 aa7.54□□□□□ -1.2
PCOLCE-209ENST00000490909 EEF1A1P5Q5VTE0 462 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms