RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 HPCAP84074 193 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 ZNHIT3Q15649 155 aaPredicted RBP6.91□□□□□ -1.3
CLDN1-202ENST00000490800 LRRC36Q1X8D7 754 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 GRAMD1BQ3KR37 738 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 CT45A2Q5DJT8 189 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 AP1ARQ63HQ0 302 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 ZAR1Q86SH2 424 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 ZNF227Q86WZ6 799 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 KRT73Q86Y46 540 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 EPHX4Q8IUS5 362 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 C9orf40Q8IXQ3 194 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 ZNF619Q8N2I2 560 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 TMEM178AQ8NBL3 297 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 MORN4Q8NDC4 146 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 ICA1LQ8NDH6 482 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 OR4N2Q8NGD1 307 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 SPPL2AQ8TCT8 520 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 THAP3Q8WTV1 239 aaPredicted RBP6.91□□□□□ -1.3
CLDN1-202ENST00000490800 GEMIN6Q8WXD5 167 aaKnown RBP6.91□□□□□ -1.3
CLDN1-202ENST00000490800 ADIPOR1Q96A54 375 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 RMND5BQ96G75 393 aaPredicted RBP6.91□□□□□ -1.3
CLDN1-202ENST00000490800 ART5Q96L15 291 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 GPR137Q96N19 417 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 BTBD9Q96Q07 612 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 WFDC6Q9BQY6 131 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 BDH2Q9BUT1 245 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 SPATA5L1Q9BVQ7 753 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 PINK1Q9BXM7 581 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 DEFB126Q9BYW3 111 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 KLHL4Q9C0H6 718 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 QRSL1Q9H0R6 528 aaKnown RBP6.91□□□□□ -1.3
CLDN1-202ENST00000490800 COQ10BQ9H8M1 238 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 MTHFD2LQ9H903 347 aaPredicted RBP6.91□□□□□ -1.3
CLDN1-202ENST00000490800 POLE3Q9NRF9 147 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 TPSG1Q9NRR2 321 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 VNN3Q9NY84 501 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 NDUFAF4Q9P032 175 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 DNAJB9Q9UBS3 223 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 TINAGQ9UJW2 476 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 BAG5Q9UL15 447 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 MKLN1Q9UL63 735 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 PPIEQ9UNP9 301 aaKnown RBP6.91□□□□□ -1.3
CLDN1-202ENST00000490800 GPR55Q9Y2T6 319 aaPredicted RBP6.91□□□□□ -1.3
CLDN1-202ENST00000490800 WDR45Q9Y484 360 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 DTNAQ9Y4J8 743 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 NPIPA5A0A0B4J1W7 369 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 CENPVL1A0A0U1RR11 272 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 AGAP5A6NIR3 686 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 SAGE2PA6NJ88 616 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 OR6C76A6NM76 312 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 NPIPA7E9PJI5 369 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 SYT5O00445 386 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 ACOX3O15254 700 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 PRKNO60260 465 aaPredicted RBP6.9□□□□□ -1.3
CLDN1-202ENST00000490800 KIAA0513O60268 411 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 SLC25A12O75746 678 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 LGI1O95970 557 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 CST1P01037 141 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 PABPC4LP0CB38 370 aaKnown RBP6.9□□□□□ -1.3
CLDN1-202ENST00000490800 NPIPA8P0DM63 369 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 ZNF26P17031 533 aaPredicted RBP6.9□□□□□ -1.3
CLDN1-202ENST00000490800 PRKAR1BP31321 381 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 PIGAP37287 484 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 PPICP45877 212 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 GSK3AP49840 483 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 HLCSP50747 726 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 IST1P53990 364 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 CASP6P55212 293 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 HSF1Q00613 529 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 EBPQ15125 230 aaKnown RBP6.9□□□□□ -1.3
CLDN1-202ENST00000490800 GPR68Q15743 365 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 NNATQ16517 81 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 MAPK14Q16539 360 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 NRF1Q16656 503 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 ZNF311Q5JNZ3 666 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 OR2T5Q6IEZ7 315 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 DHRS4L2Q6PKH6 230 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 IZUMO2Q6UXV1 221 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 TMEM179BQ7Z7N9 219 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 CARM1Q86X55 608 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 VRK2Q86Y07 508 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 LACC1Q8IV20 430 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 SIAH3Q8IW03 269 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 ZNF808Q8N4W9 903 aaPredicted RBP6.9□□□□□ -1.3
CLDN1-202ENST00000490800 ZNF441Q8N8Z8 693 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 FAM98AQ8NCA5 519 aaKnown RBP6.9□□□□□ -1.3
CLDN1-202ENST00000490800 APCDD1LQ8NCL9 501 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 B3GNT7Q8NFL0 401 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 OR4D11Q8NGI4 311 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 OR2T29Q8NH02 315 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 OR52P1PQ8NH57 321 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 RASSF5Q8WWW0 418 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 PROX1Q92786 737 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 TMBIM1Q969X1 311 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 EME1Q96AY2 570 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 ZNF300Q96RE9 604 aaPredicted RBP6.9□□□□□ -1.3
CLDN1-202ENST00000490800 SLC29A1Q99808 456 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 CIB1Q99828 191 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 AMBRA1Q9C0C7 1298 aa6.9□□□□□ -1.3
CLDN1-202ENST00000490800 NXF5Q9H1B4 397 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms