RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 UQCRHLA0A096LP55 91 aa13.72□□□□□ -0.21
COL2A1-207ENST00000490609 SMIM23A6NLE4 172 aa13.72□□□□□ -0.21
COL2A1-207ENST00000490609 E7EQL1 145 aa13.72□□□□□ -0.21
COL2A1-207ENST00000490609 KIF2AO00139 706 aaPredicted RBP13.72□□□□□ -0.21
COL2A1-207ENST00000490609 ZNF264O43296 627 aa13.72□□□□□ -0.21
COL2A1-207ENST00000490609 NPHS1O60500 1241 aa13.72□□□□□ -0.21
COL2A1-207ENST00000490609 EIF4E2O60573 245 aaKnown RBP13.72□□□□□ -0.21
COL2A1-207ENST00000490609 NUDT14O95848 222 aa13.72□□□□□ -0.21
COL2A1-207ENST00000490609 C1QCP02747 245 aa13.72□□□□□ -0.21
COL2A1-207ENST00000490609 IRX1P78414 480 aaPredicted RBP13.72□□□□□ -0.21
COL2A1-207ENST00000490609 RASGEF1BQ0VAM2 473 aa13.72□□□□□ -0.21
COL2A1-207ENST00000490609 SELENBP1Q13228 472 aa13.72□□□□□ -0.21
COL2A1-207ENST00000490609 TP53BP2Q13625 1128 aa13.72□□□□□ -0.21
COL2A1-207ENST00000490609 ZNF141Q15928 474 aa13.72□□□□□ -0.21
COL2A1-207ENST00000490609 TIGD2Q4W5G0 525 aa13.72□□□□□ -0.21
COL2A1-207ENST00000490609 AP1ARQ63HQ0 302 aa13.72□□□□□ -0.21
COL2A1-207ENST00000490609 PHC2Q8IXK0 858 aa13.72□□□□□ -0.21
COL2A1-207ENST00000490609 DDIASQ8IXT1 998 aa13.72□□□□□ -0.21
COL2A1-207ENST00000490609 CCDC63Q8NA47 563 aa13.72□□□□□ -0.21
COL2A1-207ENST00000490609 OR10H5Q8NGA6 315 aa13.72□□□□□ -0.21
COL2A1-207ENST00000490609 ADAMTS15Q8TE58 950 aa13.72□□□□□ -0.21
COL2A1-207ENST00000490609 TRMT61AQ96FX7 289 aaKnown RBP13.72□□□□□ -0.21
COL2A1-207ENST00000490609 REXO5Q96IC2 774 aaKnown RBP13.72□□□□□ -0.21
COL2A1-207ENST00000490609 THUMPD3Q9BV44 507 aaKnown RBP13.72□□□□□ -0.21
COL2A1-207ENST00000490609 LAT2Q9GZY6 243 aa13.72□□□□□ -0.21
COL2A1-207ENST00000490609 ZDHHC2Q9UIJ5 367 aa13.72□□□□□ -0.21
COL2A1-207ENST00000490609 A0A1W2PP18 115 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 SERINC4A6NH21 518 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 GJE1A6NN92 205 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 ZNF716A6NP11 495 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 ZNF724A8MTY0 619 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 GTPBP1O00178 669 aaKnown RBP13.71□□□□□ -0.21
COL2A1-207ENST00000490609 UGT2B17O75795 530 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 SLU7O95391 586 aaKnown RBP13.71□□□□□ -0.21
COL2A1-207ENST00000490609 SESN3P58005 492 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 SPOCK1Q08629 439 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 PPA1Q15181 289 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 IL23RQ5VWK5 629 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 ABLIM2Q6H8Q1 611 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 HMBOX1Q6NT76 420 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 ZCCHC23Q6ZST2 131 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 ZNF527Q8NB42 609 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 OR56A1Q8NGH5 318 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 RFWD2Q8NHY2 731 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 AGR3Q8TD06 166 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 SFXN5Q8TD22 340 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 ZG16BQ96DA0 208 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 CHMP6Q96FZ7 201 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 NMUR2Q9GZQ4 415 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 MKS1Q9NXB0 559 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 KLHL9Q9P2J3 617 aa13.71□□□□□ -0.21
COL2A1-207ENST00000490609 IGKV3D-15A0A087WSY6 115 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 PRAMEF27A3QJZ7 478 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 ABCD4O14678 606 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 SCN2BO60939 215 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 CREB1P16220 341 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 ATP6V1C1P21283 382 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 HPCAL1P37235 193 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 DIO1P49895 249 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 PHC1P78364 1004 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 FUT5Q11128 374 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 TIMM23BQ5SRD1 257 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 B3GLCTQ6Y288 498 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 TMPPEQ6ZT21 453 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 CLECL1Q8IZS7 167 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 CNPY4Q8N129 248 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 FAM71CQ8NEG0 241 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 OR2W6PQ8NHA6 318 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 UBLCP1Q8WVY7 318 aaPredicted RBP13.7□□□□□ -0.22
COL2A1-207ENST00000490609 GTPBP3Q969Y2 492 aaKnown RBP13.7□□□□□ -0.22
COL2A1-207ENST00000490609 PPP3R2Q96LZ3 170 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 OR5B2Q96R09 309 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 USB1Q9BQ65 265 aaKnown RBP13.7□□□□□ -0.22
COL2A1-207ENST00000490609 NGBQ9NPG2 151 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 FAF1Q9UNN5 650 aaPredicted RBP13.7□□□□□ -0.22
COL2A1-207ENST00000490609 SLC25A15Q9Y619 301 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 TENM1Q9UKZ4 2725 aa13.7□□□□□ -0.22
COL2A1-207ENST00000490609 OR5H1A6NKK0 313 aa13.69□□□□□ -0.22
COL2A1-207ENST00000490609 TMEM114B3SHH9 223 aa13.69□□□□□ -0.22
COL2A1-207ENST00000490609 TLX2O43763 284 aaPredicted RBP13.69□□□□□ -0.22
COL2A1-207ENST00000490609 CHEK2O96017 543 aa13.69□□□□□ -0.22
COL2A1-207ENST00000490609 IGHV3-9P01782 118 aa13.69□□□□□ -0.22
COL2A1-207ENST00000490609 FESP07332 822 aa13.69□□□□□ -0.22
COL2A1-207ENST00000490609 G6PDP11413 515 aa13.69□□□□□ -0.22
COL2A1-207ENST00000490609 UBL4AP11441 157 aa13.69□□□□□ -0.22
COL2A1-207ENST00000490609 PGM1P36871 562 aa13.69□□□□□ -0.22
COL2A1-207ENST00000490609 CASP9P55211 416 aa13.69□□□□□ -0.22
COL2A1-207ENST00000490609 CBFBQ13951 182 aa13.69□□□□□ -0.22
COL2A1-207ENST00000490609 GPR68Q15743 365 aa13.69□□□□□ -0.22
COL2A1-207ENST00000490609 STK11Q15831 433 aa13.69□□□□□ -0.22
COL2A1-207ENST00000490609 ARHGAP11BQ3KRB8 267 aa13.69□□□□□ -0.22
COL2A1-207ENST00000490609 C6orf120Q7Z4R8 191 aa13.69□□□□□ -0.22
COL2A1-207ENST00000490609 ZNF614Q8N883 585 aa13.69□□□□□ -0.22
COL2A1-207ENST00000490609 EIF1ADQ8N9N8 165 aaKnown RBP13.69□□□□□ -0.22
COL2A1-207ENST00000490609 HTRA1Q92743 480 aa13.69□□□□□ -0.22
COL2A1-207ENST00000490609 APOPT1Q96IL0 206 aa13.69□□□□□ -0.22
COL2A1-207ENST00000490609 ARL5BQ96KC2 179 aa13.69□□□□□ -0.22
COL2A1-207ENST00000490609 CCDC106Q9BWC9 280 aa13.69□□□□□ -0.22
COL2A1-207ENST00000490609 REPIN1Q9BWE0 567 aaKnown RBP13.69□□□□□ -0.22
COL2A1-207ENST00000490609 BHLHE41Q9C0J9 482 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms