RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ACTRT2Q8TDY3 377 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 SLC25A28Q96A46 364 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 KLHL29Q96CT2 875 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 CD244Q9BZW8 370 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 DERL2Q9GZP9 239 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 ZNF69Q9UC07 566 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 KLHL21Q9UJP4 597 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 MID2Q9UJV3 735 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 ICAM5Q9UMF0 924 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 REXO2Q9Y3B8 237 aaKnown RBP6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 IGKV3D-15A0A087WSY6 115 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 IGHV1-18A0A0C4DH31 117 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 CCDC151A5D8V7 595 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 ALG1L2C9J202 215 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 H0YIV9 168 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 GOLGA6L19H0YKK7 550 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 hCG_2039718K7EN88 272 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 PLOD3O60568 738 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 MPZL1O95297 269 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 IGKV1D-16P01601 117 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 KLK1P06870 262 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 MTHFD2P13995 350 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 PGAM1P18669 254 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 COL8A2P25067 703 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 SLC1A3P43003 542 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 VPS41P49754 854 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 RAC3P60763 192 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 SLC18A2Q05940 514 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 FOXF1Q12946 379 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 TRIP13Q15645 432 aaPredicted RBP6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 FAM189A2Q15884 450 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 ADRM1Q16186 407 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 GRAMD1BQ3KR37 738 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 TMEM176BQ3YBM2 270 aaPredicted RBP6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 RUSC1-AS1Q66K80 236 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 OLFML2AQ68BL7 652 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 VHLLQ6RSH7 139 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 CCBE1Q6UXH8 406 aaPredicted RBP6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 VSTM4Q8IW00 320 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 CDK20Q8IZL9 346 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 TXLNBQ8N3L3 684 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 C17orf78Q8N4C9 275 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 CDYL2Q8N8U2 506 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 SLC16A11Q8NCK7 471 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 C1orf162Q8NEQ5 155 aaPredicted RBP6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 OR7G2Q8NG99 324 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 OR9A2Q8NGT5 310 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 FAM110DQ8TAY7 271 aaPredicted RBP6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 ZFP90Q8TF47 636 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 CERS2Q96G23 380 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 WWC2-AS2Q96NR7 200 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 TBL1XR1Q9BZK7 514 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 ASB6Q9NWX5 421 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 AMDHD2Q9Y303 409 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 PSAT1Q9Y617 370 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 U3KQE9 123 aa6.1□□□□□ -1.43
PDLIM1-203ENST00000490391 ZNF716A6NP11 495 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 K7EPI3 171 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 FOXE1O00358 373 aaPredicted RBP6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 BANF1O75531 89 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 RP2O75695 350 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 UTS2O95399 124 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 PSMG1O95456 288 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 HPXP02790 462 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 ERCC1P07992 297 aaPredicted RBP6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 SELEP16581 610 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 ACHEP22303 614 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 PCGF2P35227 344 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 GP5P40197 560 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 CLK3P49761 638 aaKnown RBP6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 ZNF41P51814 821 aaPredicted RBP6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 POU3F1Q03052 451 aaPredicted RBP6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 HGFACQ04756 655 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 ZNF155Q12901 538 aaPredicted RBP6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 TBX2Q13207 712 aaPredicted RBP6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 SPA17Q15506 151 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 TAF9Q16594 264 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 DECR1Q16698 335 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 ERCC6LQ2NKX8 1250 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 KLF17Q5JT82 389 aaPredicted RBP6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 C1QTNF12Q5T7M4 302 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 SEL1L2Q5TEA6 688 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 DCAF12L2Q5VW00 463 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 ABLIM2Q6H8Q1 611 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 ACSM5Q6NUN0 579 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 TRMT10BQ6PF06 316 aaKnown RBP6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 C16orf87Q6PH81 154 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 SPATC1Q76KD6 591 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 GSTA5Q7RTV2 222 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 ZC3HC1Q86WB0 502 aaKnown RBP6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 CNGA4Q8IV77 575 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 IGDCC3Q8IVU1 814 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 CCDC170Q8IYT3 715 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 UBE2J2Q8N2K1 259 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 RIBC1Q8N443 379 aaPredicted RBP6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 ZNF527Q8NB42 609 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 NUP37Q8NFH4 326 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 OR52E4Q8NGH9 312 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 TRPC4APQ8TEL6 797 aa6.09□□□□□ -1.43
PDLIM1-203ENST00000490391 UBTD2Q8WUN7 234 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms