RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 ROBO4Q8WZ75 1007 aa17.66■□□□□ 0.42
SMC4-222ENST00000490207 NINJ1Q92982 152 aa17.66■□□□□ 0.42
SMC4-222ENST00000490207 ITCHQ96J02 903 aa17.66■□□□□ 0.42
SMC4-222ENST00000490207 TRNT1Q96Q11 434 aaKnown RBP17.66■□□□□ 0.42
SMC4-222ENST00000490207 SLC38A1Q9H2H9 487 aa17.66■□□□□ 0.42
SMC4-222ENST00000490207 TCF7L2Q9NQB0 619 aa17.66■□□□□ 0.42
SMC4-222ENST00000490207 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.66■□□□□ 0.42
SMC4-222ENST00000490207 SLC6A13Q9NSD5 602 aa17.66■□□□□ 0.42
SMC4-222ENST00000490207 ST6GALNAC2Q9UJ37 374 aa17.66■□□□□ 0.42
SMC4-222ENST00000490207 FAM234BA2RU67 622 aa17.65■□□□□ 0.42
SMC4-222ENST00000490207 CASKO14936 926 aa17.65■□□□□ 0.42
SMC4-222ENST00000490207 BCAS1O75363 584 aaPredicted RBP17.65■□□□□ 0.42
SMC4-222ENST00000490207 TGDSO95455 350 aa17.65■□□□□ 0.42
SMC4-222ENST00000490207 CHRM4P08173 479 aa17.65■□□□□ 0.42
SMC4-222ENST00000490207 PABPC4LP0CB38 370 aaKnown RBP17.65■□□□□ 0.42
SMC4-222ENST00000490207 NID1P14543 1247 aa17.65■□□□□ 0.42
SMC4-222ENST00000490207 AGTR1P30556 359 aa17.65■□□□□ 0.42
SMC4-222ENST00000490207 UGT2B10P36537 528 aa17.65■□□□□ 0.42
SMC4-222ENST00000490207 SESN3P58005 492 aa17.65■□□□□ 0.42
SMC4-222ENST00000490207 POU4F3Q15319 338 aa17.65■□□□□ 0.42
SMC4-222ENST00000490207 TESK1Q15569 626 aa17.65■□□□□ 0.42
SMC4-222ENST00000490207 EXOC3L2Q2M3D2 409 aa17.65■□□□□ 0.42
SMC4-222ENST00000490207 AP1ARQ63HQ0 302 aa17.65■□□□□ 0.42
SMC4-222ENST00000490207 LRRC74BQ6ZQY2 392 aa17.65■□□□□ 0.42
SMC4-222ENST00000490207 ZNF563Q8TA94 476 aa17.65■□□□□ 0.42
SMC4-222ENST00000490207 WDR60Q8WVS4 1066 aa17.65■□□□□ 0.42
SMC4-222ENST00000490207 ZG16BQ96DA0 208 aa17.65■□□□□ 0.42
SMC4-222ENST00000490207 LIME1Q9H400 295 aa17.65■□□□□ 0.42
SMC4-222ENST00000490207 VIPAS39Q9H9C1 493 aa17.65■□□□□ 0.42
SMC4-222ENST00000490207 A0A1W2PNR3 127 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 CLDN24A6NM45 220 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 HRGP04196 525 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 NR2F1P10589 423 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 H2AFXP16104 143 aaPredicted RBP17.64■□□□□ 0.41
SMC4-222ENST00000490207 IST1P53990 364 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 PPP2R2AP63151 447 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 KCNJ10P78508 379 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 PLAURQ03405 335 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 MERTKQ12866 999 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 RNPS1Q15287 305 aaKnown RBP17.64■□□□□ 0.41
SMC4-222ENST00000490207 GTDC1Q4AE62 458 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 C6orf10Q5SRN2 563 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 PLEKHM3Q6ZWE6 761 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 FCRLAQ7L513 359 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 ARFGAP2Q8N6H7 521 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 ABHD3Q8WU67 409 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 VPS33AQ96AX1 596 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 MED18Q9BUE0 208 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 EXOSC3Q9NQT5 275 aaKnown RBP17.64■□□□□ 0.41
SMC4-222ENST00000490207 PLSCR4Q9NRQ2 329 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 SERINC1Q9NRX5 453 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 ACER3Q9NUN7 267 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 KLHL28Q9NXS3 571 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 P2RX2Q9UBL9 471 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 SPG11Q96JI7 2443 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 CELSR1Q9NYQ6 3014 aa17.64■□□□□ 0.41
SMC4-222ENST00000490207 C16orf97H3BN30 126 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 ZCCHC18P0CG32 403 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 RPS4Y1P22090 263 aaKnown RBP17.63■□□□□ 0.41
SMC4-222ENST00000490207 RYKP34925 604 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 MAGEA8P43361 318 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 MRPL19P49406 292 aaKnown RBP17.63■□□□□ 0.41
SMC4-222ENST00000490207 IDH3AP50213 366 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 ART1P52961 327 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 MVDP53602 400 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 PAMR1Q6UXH9 720 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 ZNF550Q7Z398 422 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 CMIPQ8IY22 773 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 AURKBQ96GD4 344 aaPredicted RBP17.63■□□□□ 0.41
SMC4-222ENST00000490207 WFIKKN1Q96NZ8 548 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 OR5B2Q96R09 309 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 EBF4Q9BQW3 602 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 CCDC28BQ9BUN5 200 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 KLHL4Q9C0H6 718 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 C12orf49Q9H741 205 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 TPT1P8Q9HAU6 139 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 INTS9Q9NV88 658 aaKnown RBP17.63■□□□□ 0.41
SMC4-222ENST00000490207 ZNF226Q9NYT6 803 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 KLHL13Q9P2N7 655 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 EDARQ9UNE0 448 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 PLEKHA6Q9Y2H5 1048 aa17.63■□□□□ 0.41
SMC4-222ENST00000490207 IGHV3-15A0A0B4J1V0 119 aa17.62■□□□□ 0.41
SMC4-222ENST00000490207 AGAP5A6NIR3 686 aa17.62■□□□□ 0.41
SMC4-222ENST00000490207 ETFAP13804 333 aa17.62■□□□□ 0.41
SMC4-222ENST00000490207 DNASE1P24855 282 aa17.62■□□□□ 0.41
SMC4-222ENST00000490207 CRATP43155 626 aa17.62■□□□□ 0.41
SMC4-222ENST00000490207 AQP5P55064 265 aa17.62■□□□□ 0.41
SMC4-222ENST00000490207 RAC3P60763 192 aa17.62■□□□□ 0.41
SMC4-222ENST00000490207 DSTNP60981 165 aa17.62■□□□□ 0.41
SMC4-222ENST00000490207 GNA13Q14344 377 aa17.62■□□□□ 0.41
SMC4-222ENST00000490207 TMEM201Q5SNT2 666 aa17.62■□□□□ 0.41
SMC4-222ENST00000490207 STK32CQ86UX6 486 aa17.62■□□□□ 0.41
SMC4-222ENST00000490207 SLC25A43Q8WUT9 341 aaPredicted RBP17.62■□□□□ 0.41
SMC4-222ENST00000490207 CNOT9Q92600 299 aaKnown RBP17.62■□□□□ 0.41
SMC4-222ENST00000490207 FANCFQ9NPI8 374 aa17.62■□□□□ 0.41
SMC4-222ENST00000490207 CCM2LQ9NUG4 571 aaPredicted RBP17.62■□□□□ 0.41
SMC4-222ENST00000490207 SPIN1Q9Y657 262 aaPredicted RBP17.62■□□□□ 0.41
SMC4-222ENST00000490207 BCHEP06276 602 aa17.61■□□□□ 0.41
SMC4-222ENST00000490207 DBIP07108 87 aaKnown RBP17.61■□□□□ 0.41
SMC4-222ENST00000490207 IL7RP16871 459 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms