RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 TTC23Q5W5X9 447 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 TMEM225Q6GV28 225 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 BTNL3Q6UXE8 466 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 HSD17B13Q7Z5P4 300 aaPredicted RBP2.29□□□□□ -2.04
RFC4-213ENST00000489028 TMEM17Q86X19 198 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 ZNF679Q8IYX0 411 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 ZCCHC7Q8N3Z6 543 aaKnown RBP2.29□□□□□ -2.04
RFC4-213ENST00000489028 RNF175Q8N4F7 328 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 Q8N9L7 120 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 EIF1ADQ8N9N8 165 aaKnown RBP2.29□□□□□ -2.04
RFC4-213ENST00000489028 CTNNBL1Q8WYA6 563 aaPredicted RBP2.29□□□□□ -2.04
RFC4-213ENST00000489028 OSTF1Q92882 214 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 PSMG2Q969U7 264 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 HAVCR1Q96D42 359 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 TCHPQ9BT92 498 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 VCX2Q9H322 139 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 RBM28Q9NW13 759 aaKnown RBP2.29□□□□□ -2.04
RFC4-213ENST00000489028 DCAF16Q9NXF7 216 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 MRPL39Q9NYK5 338 aaKnown RBP2.29□□□□□ -2.04
RFC4-213ENST00000489028 ONECUT1Q9UBC0 465 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 CYTH4Q9UIA0 394 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 CRLS1Q9UJA2 301 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 RPH3ALQ9UNE2 315 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 MAD1L1Q9Y6D9 718 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 SLCO1B1Q9Y6L6 691 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 SAGE2PA6NJ88 616 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 CCDC169A6NNP5 214 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 RSPH10B2B2RC85 870 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 E9PLD3 99 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 SCGNO76038 276 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 SEMG1P04279 462 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 RSPH10BP0C881 870 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 PSG2P11465 335 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 ZNF44P15621 663 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 NT5EP21589 574 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 CDH5P33151 784 aaPredicted RBP2.28□□□□□ -2.04
RFC4-213ENST00000489028 STARP49675 285 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 CEBPDP49716 269 aaPredicted RBP2.28□□□□□ -2.04
RFC4-213ENST00000489028 SULT1E1P49888 294 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 BDH1Q02338 343 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 PLOD1Q02809 727 aaPredicted RBP2.28□□□□□ -2.04
RFC4-213ENST00000489028 NCBP1Q09161 790 aaKnown RBP2.28□□□□□ -2.04
RFC4-213ENST00000489028 ELAVL3Q14576 367 aaKnown RBP2.28□□□□□ -2.04
RFC4-213ENST00000489028 KCNJ11Q14654 390 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 RABL6Q3YEC7 729 aaPredicted RBP2.28□□□□□ -2.04
RFC4-213ENST00000489028 FAM120AOSQ5T036 256 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 ATF7IP2Q5U623 682 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 STAC2Q6ZMT1 411 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 Q6ZPB1 254 aaPredicted RBP2.28□□□□□ -2.04
RFC4-213ENST00000489028 C16orf62Q7Z3J2 963 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 HSD11B1LQ7Z5J1 315 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 ACOT1Q86TX2 421 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 ANKFN1Q8N957 763 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 LINC01555Q8NAE3 123 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 ZSCAN4Q8NAM6 433 aaPredicted RBP2.28□□□□□ -2.04
RFC4-213ENST00000489028 OR13C2Q8NGS9 318 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 NANPQ8TBE9 248 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 TMEM80Q96HE8 168 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 RIT2Q99578 217 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 SLC39A3Q9BRY0 314 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 CAPS2Q9BXY5 557 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 CRNKL1Q9BZJ0 848 aaKnown RBP2.28□□□□□ -2.04
RFC4-213ENST00000489028 PTGES2Q9H7Z7 377 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 GPN2Q9H9Y4 310 aaPredicted RBP2.28□□□□□ -2.04
RFC4-213ENST00000489028 ELOVL3Q9HB03 270 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 APMAPQ9HDC9 416 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 ZNF331Q9NQX6 463 aaPredicted RBP2.28□□□□□ -2.04
RFC4-213ENST00000489028 AIPL1Q9NZN9 384 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 GSTK1Q9Y2Q3 226 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 ASB3Q9Y575 518 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 GMPPBQ9Y5P6 360 aa2.28□□□□□ -2.04
RFC4-213ENST00000489028 ATP10DQ9P241 1426 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 ANKRD30BQ9BXX2 1392 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 ZSCAN5BA6NJL1 495 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 FAM74A7A6NL05 159 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 H0Y8G0 127 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 AP3B1O00203 1094 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 N4BP1O75113 896 aaKnown RBP2.27□□□□□ -2.05
RFC4-213ENST00000489028 SNNO75324 88 aaPredicted RBP2.27□□□□□ -2.05
RFC4-213ENST00000489028 TRIM3O75382 744 aaPredicted RBP2.27□□□□□ -2.05
RFC4-213ENST00000489028 LYPLA1O75608 230 aaPredicted RBP2.27□□□□□ -2.05
RFC4-213ENST00000489028 SURF6O75683 361 aaKnown RBP2.27□□□□□ -2.05
RFC4-213ENST00000489028 MMP23AO75900 390 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 NEBLO76041 1014 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 CD55P08174 381 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 STSP08842 583 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 ZNF853P0CG23 659 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 HNF1AP20823 631 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 TBXA2RP21731 343 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 ATP5A1P25705 553 aaKnown RBP2.27□□□□□ -2.05
RFC4-213ENST00000489028 PBLDP30039 288 aaPredicted RBP2.27□□□□□ -2.05
RFC4-213ENST00000489028 RPL4P36578 427 aaKnown RBP2.27□□□□□ -2.05
RFC4-213ENST00000489028 SSR1P43307 286 aaKnown RBP2.27□□□□□ -2.05
RFC4-213ENST00000489028 MAGEA5P43359 124 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 GNPDA1P46926 289 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 PLA2G16P53816 162 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 AIF1P55008 147 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 UBE2HP62256 183 aa2.27□□□□□ -2.05
RFC4-213ENST00000489028 OTUD4Q01804 1114 aaKnown RBP2.27□□□□□ -2.05
RFC4-213ENST00000489028 ZNF45Q02386 682 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms