RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 ADAM8P78325 824 aa20.59■□□□□ 0.89
CUL4A-209ENST00000488558 HPCAP84074 193 aa20.59■□□□□ 0.89
CUL4A-209ENST00000488558 MAPK14Q16539 360 aa20.59■□□□□ 0.89
CUL4A-209ENST00000488558 TIGD2Q4W5G0 525 aa20.59■□□□□ 0.89
CUL4A-209ENST00000488558 C22orf34Q6ZV56 151 aa20.59■□□□□ 0.89
CUL4A-209ENST00000488558 OLIG3Q7RTU3 272 aa20.59■□□□□ 0.89
CUL4A-209ENST00000488558 MAELQ96JY0 434 aaKnown RBP20.59■□□□□ 0.89
CUL4A-209ENST00000488558 PANX1Q96RD7 426 aa20.59■□□□□ 0.89
CUL4A-209ENST00000488558 ZBTB18Q99592 522 aa20.59■□□□□ 0.89
CUL4A-209ENST00000488558 PIP5K1AQ99755 562 aa20.59■□□□□ 0.89
CUL4A-209ENST00000488558 NKIRAS1Q9NYS0 192 aa20.59■□□□□ 0.89
CUL4A-209ENST00000488558 ZNF469Q96JG9 3925 aaPredicted RBP20.58■□□□□ 0.89
CUL4A-209ENST00000488558 PRKD3O94806 890 aa20.58■□□□□ 0.89
CUL4A-209ENST00000488558 THBDP07204 575 aa20.58■□□□□ 0.89
CUL4A-209ENST00000488558 FPR1P21462 350 aa20.58■□□□□ 0.89
CUL4A-209ENST00000488558 LOXP28300 417 aaPredicted RBP20.58■□□□□ 0.89
CUL4A-209ENST00000488558 SESN3P58005 492 aa20.58■□□□□ 0.89
CUL4A-209ENST00000488558 MAGOHP61326 146 aaKnown RBP20.58■□□□□ 0.89
CUL4A-209ENST00000488558 FOXD4Q12950 439 aaPredicted RBP20.58■□□□□ 0.89
CUL4A-209ENST00000488558 BEX5Q5H9J7 111 aa20.58■□□□□ 0.89
CUL4A-209ENST00000488558 TFAP2EQ6VUC0 442 aa20.58■□□□□ 0.89
CUL4A-209ENST00000488558 CXorf67Q86X51 503 aaPredicted RBP20.58■□□□□ 0.89
CUL4A-209ENST00000488558 MGARPQ8TDB4 240 aa20.58■□□□□ 0.89
CUL4A-209ENST00000488558 SLC25A43Q8WUT9 341 aaPredicted RBP20.58■□□□□ 0.89
CUL4A-209ENST00000488558 ZC3HAV1LQ96H79 300 aaKnown RBP20.58■□□□□ 0.89
CUL4A-209ENST00000488558 WDR55Q9H6Y2 383 aaPredicted RBP20.58■□□□□ 0.89
CUL4A-209ENST00000488558 C12orf49Q9H741 205 aa20.58■□□□□ 0.89
CUL4A-209ENST00000488558 BCO1Q9HAY6 547 aa20.58■□□□□ 0.89
CUL4A-209ENST00000488558 EXOSC3Q9NQT5 275 aaKnown RBP20.58■□□□□ 0.89
CUL4A-209ENST00000488558 SERINC1Q9NRX5 453 aa20.58■□□□□ 0.89
CUL4A-209ENST00000488558 ACER3Q9NUN7 267 aa20.58■□□□□ 0.89
CUL4A-209ENST00000488558 LIPT1Q9Y234 373 aa20.58■□□□□ 0.89
CUL4A-209ENST00000488558 FLNAP21333 2647 aaKnown RBP20.58■□□□□ 0.89
CUL4A-209ENST00000488558 SETD2Q9BYW2 2564 aaPredicted RBP20.58■□□□□ 0.88
CUL4A-209ENST00000488558 CCDC154A6NI56 674 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 HMGN4O00479 90 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 CYP7B1O75881 506 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 H6PDO95479 791 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 YES1P07947 543 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 IDO1P14902 403 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 FOSL1P15407 271 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 IL12AP29459 219 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 MAGEA8P43361 318 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 NME5P56597 212 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 PDCD4Q53EL6 469 aaKnown RBP20.57■□□□□ 0.88
CUL4A-209ENST00000488558 BEND6Q5SZJ8 279 aaPredicted RBP20.57■□□□□ 0.88
CUL4A-209ENST00000488558 ANKRD34AQ69YU3 496 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 C20orf204Q6ZNR8 217 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 PLEKHM3Q6ZWE6 761 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 TUSC5Q8IXB3 177 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 ATP6V1C2Q8NEY4 427 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 PIGTQ969N2 578 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 TRNT1Q96Q11 434 aaKnown RBP20.57■□□□□ 0.88
CUL4A-209ENST00000488558 OR52E6Q96RD3 313 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 ACTR6Q9GZN1 396 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 MANSC1Q9H8J5 431 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 TMBIM4Q9HC24 238 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 DLL4Q9NR61 685 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 KLHL9Q9P2J3 617 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 NF1P21359 2839 aa20.57■□□□□ 0.88
CUL4A-209ENST00000488558 GOLGA8QA0A0J9YX86 632 aa20.56■□□□□ 0.88
CUL4A-209ENST00000488558 GOLGA8OA6NCC3 632 aa20.56■□□□□ 0.88
CUL4A-209ENST00000488558 GOLGA8NF8WBI6 632 aa20.56■□□□□ 0.88
CUL4A-209ENST00000488558 KLF11O14901 512 aa20.56■□□□□ 0.88
CUL4A-209ENST00000488558 HOXC12P31275 282 aa20.56■□□□□ 0.88
CUL4A-209ENST00000488558 MERTKQ12866 999 aa20.56■□□□□ 0.88
CUL4A-209ENST00000488558 ACKR1Q16570 336 aa20.56■□□□□ 0.88
CUL4A-209ENST00000488558 GPAT3Q53EU6 434 aa20.56■□□□□ 0.88
CUL4A-209ENST00000488558 RNF130Q86XS8 419 aa20.56■□□□□ 0.88
CUL4A-209ENST00000488558 CMIPQ8IY22 773 aa20.56■□□□□ 0.88
CUL4A-209ENST00000488558 GABRG1Q8N1C3 465 aa20.56■□□□□ 0.88
CUL4A-209ENST00000488558 LRRC75A-AS1Q8N1F1 130 aa20.56■□□□□ 0.88
CUL4A-209ENST00000488558 STEAP2Q8NFT2 490 aa20.56■□□□□ 0.88
CUL4A-209ENST00000488558 PMM1Q92871 262 aa20.56■□□□□ 0.88
CUL4A-209ENST00000488558 HS3ST6Q96QI5 342 aa20.56■□□□□ 0.88
CUL4A-209ENST00000488558 HDHD5Q9BXW7 423 aa20.56■□□□□ 0.88
CUL4A-209ENST00000488558 QRSL1Q9H0R6 528 aaKnown RBP20.56■□□□□ 0.88
CUL4A-209ENST00000488558 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.56■□□□□ 0.88
CUL4A-209ENST00000488558 SPIN1Q9Y657 262 aaPredicted RBP20.56■□□□□ 0.88
CUL4A-209ENST00000488558 A0A1W2PNR3 127 aa20.55■□□□□ 0.88
CUL4A-209ENST00000488558 PRAMEF27A3QJZ7 478 aa20.55■□□□□ 0.88
CUL4A-209ENST00000488558 GCM2O75603 506 aaPredicted RBP20.55■□□□□ 0.88
CUL4A-209ENST00000488558 IL6P05231 212 aa20.55■□□□□ 0.88
CUL4A-209ENST00000488558 ENPP1P22413 925 aa20.55■□□□□ 0.88
CUL4A-209ENST00000488558 FKBP2P26885 142 aaKnown RBP20.55■□□□□ 0.88
CUL4A-209ENST00000488558 APOBEC1P41238 236 aaKnown RBP20.55■□□□□ 0.88
CUL4A-209ENST00000488558 NR1H2P55055 460 aa20.55■□□□□ 0.88
CUL4A-209ENST00000488558 NUFIP2Q7Z417 695 aaKnown RBP20.55■□□□□ 0.88
CUL4A-209ENST00000488558 OR5B2Q96R09 309 aa20.55■□□□□ 0.88
CUL4A-209ENST00000488558 PSD2Q9BQI7 771 aa20.55■□□□□ 0.88
CUL4A-209ENST00000488558 INPP5KQ9BT40 448 aa20.55■□□□□ 0.88
CUL4A-209ENST00000488558 CCDC106Q9BWC9 280 aa20.55■□□□□ 0.88
CUL4A-209ENST00000488558 ING1Q9UK53 422 aaPredicted RBP20.55■□□□□ 0.88
CUL4A-209ENST00000488558 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.54■□□□□ 0.88
CUL4A-209ENST00000488558 C9JVG2 144 aa20.54■□□□□ 0.88
CUL4A-209ENST00000488558 SMAD9O15198 467 aaKnown RBP20.54■□□□□ 0.88
CUL4A-209ENST00000488558 KLF4O43474 513 aa20.54■□□□□ 0.88
CUL4A-209ENST00000488558 CYTIPO60759 359 aa20.54■□□□□ 0.88
CUL4A-209ENST00000488558 BCAS1O75363 584 aaPredicted RBP20.54■□□□□ 0.88
CUL4A-209ENST00000488558 KITP10721 976 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms