RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 ST8SIA1Q92185 356 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 SRXN1Q9BYN0 137 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 PIGMQ9H3S5 423 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 IKZF5Q9H5V7 419 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 NPHS2Q9NP85 383 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 ACER3Q9NUN7 267 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 DNAJB12Q9NXW2 375 aaKnown RBP12.72□□□□□ -0.37
COL9A2-208ENST00000488463 CRIM1Q9NZV1 1036 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 STOML1Q9UBI4 398 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 PACSIN3Q9UKS6 424 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 MTORP42345 2549 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 CLIC1O00299 241 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 NR5A2O00482 541 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 MSTNO14793 375 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 ANP32DO95626 131 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 NR2F1P10589 423 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 SFTPDP35247 375 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 CRATP43155 626 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 PCYT1AP49585 367 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 CCR4P51679 360 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 EEF1A1P68104 462 aaKnown RBP12.71□□□□□ -0.37
COL9A2-208ENST00000488463 SORDQ00796 357 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 AGKQ53H12 422 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 EEF1A1P5Q5VTE0 462 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 HBMQ6B0K9 141 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 PLEKHM3Q6ZWE6 761 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 P4HA3Q7Z4N8 544 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 LUZP2Q86TE4 346 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 CMIPQ8IY22 773 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 OSTF1Q92882 214 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 SIKE1Q9BRV8 207 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 CCDC106Q9BWC9 280 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.71□□□□□ -0.37
COL9A2-208ENST00000488463 PAQR5Q9NXK6 330 aaPredicted RBP12.71□□□□□ -0.37
COL9A2-208ENST00000488463 GALNT8Q9NY28 637 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 VAPAQ9P0L0 249 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 P2RX2Q9UBL9 471 aa12.71□□□□□ -0.37
COL9A2-208ENST00000488463 A0A1W2PP18 115 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 CDHR4A6H8M9 788 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 AP3D1O14617 1153 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 SS18L1O75177 396 aaPredicted RBP12.7□□□□□ -0.38
COL9A2-208ENST00000488463 CYP7B1O75881 506 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 CD8BP10966 210 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 FCGR2AP12318 317 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 PGCP20142 388 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 ME2P23368 584 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 KIR2DL3P43628 341 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 HPCAP84074 193 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 FADDQ13158 208 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 SELENBP1Q13228 472 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 SGCBQ16585 318 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 ZNF239Q16600 458 aaKnown RBP12.7□□□□□ -0.38
COL9A2-208ENST00000488463 TMEM176BQ3YBM2 270 aaPredicted RBP12.7□□□□□ -0.38
COL9A2-208ENST00000488463 RPS26P11Q5JNZ5 115 aaPredicted RBP12.7□□□□□ -0.38
COL9A2-208ENST00000488463 FAM214BQ7L5A3 538 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 RETREG3Q86VR2 466 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 CNEP1R1Q8N9A8 125 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 RNF128Q8TEB7 428 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 WDR60Q8WVS4 1066 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 MAL2Q969L2 176 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 TMEM19Q96HH6 336 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 RBM24Q9BX46 236 aaKnown RBP12.7□□□□□ -0.38
COL9A2-208ENST00000488463 OPN3Q9H1Y3 402 aaPredicted RBP12.7□□□□□ -0.38
COL9A2-208ENST00000488463 CCDC134Q9H6E4 229 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 SLC24A3Q9HC58 644 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 A4GALTQ9NPC4 353 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 ING1Q9UK53 422 aaPredicted RBP12.7□□□□□ -0.38
COL9A2-208ENST00000488463 F8P00451 2351 aa12.7□□□□□ -0.38
COL9A2-208ENST00000488463 ZNF469Q96JG9 3925 aaPredicted RBP12.69□□□□□ -0.38
COL9A2-208ENST00000488463 A0A0G2JND7 137 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 FAAHO00519 579 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 BCHEP06276 602 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 DBIP07108 87 aaKnown RBP12.69□□□□□ -0.38
COL9A2-208ENST00000488463 KLK2P20151 261 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 CCKARP32238 428 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 PEX19P40855 299 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 CARD18P57730 90 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 SIRPAP78324 504 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 GUCY1A3Q02108 690 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 ADRM1Q16186 407 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 MRPL2Q5T653 305 aaKnown RBP12.69□□□□□ -0.38
COL9A2-208ENST00000488463 METTL21CQ5VZV1 264 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 ZNF836Q6ZNA1 936 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 VRK2Q86Y07 508 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 ADGRG3Q86Y34 549 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 ZZZ3Q8IYH5 903 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 DPP10Q8N608 796 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 FAM222BQ8WU58 562 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 ROBO4Q8WZ75 1007 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 GMPPAQ96IJ6 420 aaPredicted RBP12.69□□□□□ -0.38
COL9A2-208ENST00000488463 ZNF559Q9BR84 538 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 BCL2L10Q9HD36 194 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 FGFR1OP2Q9NVK5 253 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 RLIMQ9NVW2 624 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 THUMPD1Q9NXG2 353 aaKnown RBP12.69□□□□□ -0.38
COL9A2-208ENST00000488463 MCTS1Q9ULC4 181 aaKnown RBP12.69□□□□□ -0.38
COL9A2-208ENST00000488463 CLEC4AQ9UMR7 237 aa12.69□□□□□ -0.38
COL9A2-208ENST00000488463 A0A0G2JPF8 293 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 A0A1W2PNR3 127 aa12.68□□□□□ -0.38
COL9A2-208ENST00000488463 HNRNPCL2B2RXH8 293 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms