RNA–Protein interactions for RNA: ENST00000488185.2

PKD1-221, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-221ENST00000488185 SELENBP1Q13228 472 aa18.31■□□□□ 0.52
PKD1-221ENST00000488185 QPRTQ15274 297 aa18.31■□□□□ 0.52
PKD1-221ENST00000488185 NDUFAF6Q330K2 333 aa18.31■□□□□ 0.52
PKD1-221ENST00000488185 SPNS3Q6ZMD2 512 aa18.31■□□□□ 0.52
PKD1-221ENST00000488185 LRRC74BQ6ZQY2 392 aa18.31■□□□□ 0.52
PKD1-221ENST00000488185 CMIPQ8IY22 773 aa18.31■□□□□ 0.52
PKD1-221ENST00000488185 ZNF614Q8N883 585 aa18.31■□□□□ 0.52
PKD1-221ENST00000488185 LINC01560Q8TB33 94 aa18.31■□□□□ 0.52
PKD1-221ENST00000488185 TMEM234Q8WY98 164 aa18.31■□□□□ 0.52
PKD1-221ENST00000488185 CPNE4Q96A23 557 aaPredicted RBP18.31■□□□□ 0.52
PKD1-221ENST00000488185 ZG16BQ96DA0 208 aa18.31■□□□□ 0.52
PKD1-221ENST00000488185 ELAC2Q9BQ52 826 aaKnown RBP18.31■□□□□ 0.52
PKD1-221ENST00000488185 GPATCH1Q9BRR8 931 aaKnown RBP18.31■□□□□ 0.52
PKD1-221ENST00000488185 PRRG4Q9BZD6 226 aa18.31■□□□□ 0.52
PKD1-221ENST00000488185 RMND5AQ9H871 391 aa18.31■□□□□ 0.52
PKD1-221ENST00000488185 MTHFD2LQ9H903 347 aaPredicted RBP18.31■□□□□ 0.52
PKD1-221ENST00000488185 NDRG3Q9UGV2 375 aa18.31■□□□□ 0.52
PKD1-221ENST00000488185 ADAM21Q9UKJ8 722 aa18.31■□□□□ 0.52
PKD1-221ENST00000488185 EMC9Q9Y3B6 208 aa18.31■□□□□ 0.52
PKD1-221ENST00000488185 FAM234BA2RU67 622 aa18.3■□□□□ 0.52
PKD1-221ENST00000488185 AGAP5A6NIR3 686 aa18.3■□□□□ 0.52
PKD1-221ENST00000488185 C1QCP02747 245 aa18.3■□□□□ 0.52
PKD1-221ENST00000488185 PGCP20142 388 aa18.3■□□□□ 0.52
PKD1-221ENST00000488185 DRD4P21917 467 aa18.3■□□□□ 0.52
PKD1-221ENST00000488185 SHC1P29353 583 aa18.3■□□□□ 0.52
PKD1-221ENST00000488185 POLR2JP52435 117 aaKnown RBP18.3■□□□□ 0.52
PKD1-221ENST00000488185 KCNJ10P78508 379 aa18.3■□□□□ 0.52
PKD1-221ENST00000488185 CHRNEQ04844 493 aa18.3■□□□□ 0.52
PKD1-221ENST00000488185 ZNF239Q16600 458 aaKnown RBP18.3■□□□□ 0.52
PKD1-221ENST00000488185 RNF128Q8TEB7 428 aa18.3■□□□□ 0.52
PKD1-221ENST00000488185 THUMPD3Q9BV44 507 aaKnown RBP18.3■□□□□ 0.52
PKD1-221ENST00000488185 SLC38A1Q9H2H9 487 aa18.3■□□□□ 0.52
PKD1-221ENST00000488185 TMEM185BQ9H7F4 350 aa18.3■□□□□ 0.52
PKD1-221ENST00000488185 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.3■□□□□ 0.52
PKD1-221ENST00000488185 ACER3Q9NUN7 267 aa18.3■□□□□ 0.52
PKD1-221ENST00000488185 PROCRQ9UNN8 238 aa18.3■□□□□ 0.52
PKD1-221ENST00000488185 TESMINQ9Y4I5 508 aa18.3■□□□□ 0.52
PKD1-221ENST00000488185 SH3D21A4FU49 640 aa18.29■□□□□ 0.52
PKD1-221ENST00000488185 SMNDC1O75940 238 aaKnown RBP eCLIP18.29■□□□□ 0.525e-7■■■■□ 24.5
PKD1-221ENST00000488185 H6PDO95479 791 aa18.29■□□□□ 0.52
PKD1-221ENST00000488185 RPS4Y1P22090 263 aaKnown RBP18.29■□□□□ 0.52
PKD1-221ENST00000488185 FKBP2P26885 142 aaKnown RBP18.29■□□□□ 0.52
PKD1-221ENST00000488185 DNAJA1P31689 397 aaKnown RBP18.29■□□□□ 0.52
PKD1-221ENST00000488185 RAC3P60763 192 aa18.29■□□□□ 0.52
PKD1-221ENST00000488185 HPCAP84074 193 aa18.29■□□□□ 0.52
PKD1-221ENST00000488185 FAM27E3Q08E93 113 aa18.29■□□□□ 0.52
PKD1-221ENST00000488185 RNPS1Q15287 305 aaKnown RBP18.29■□□□□ 0.52
PKD1-221ENST00000488185 OLIG3Q7RTU3 272 aa18.29■□□□□ 0.52
PKD1-221ENST00000488185 ZNF610Q8N9Z0 462 aa18.29■□□□□ 0.52
PKD1-221ENST00000488185 C10orf82Q8WW14 230 aa18.29■□□□□ 0.52
PKD1-221ENST00000488185 ITCHQ96J02 903 aa18.29■□□□□ 0.52
PKD1-221ENST00000488185 OPN3Q9H1Y3 402 aaPredicted RBP18.29■□□□□ 0.52
PKD1-221ENST00000488185 SLC6A13Q9NSD5 602 aa18.29■□□□□ 0.52
PKD1-221ENST00000488185 THUMPD1Q9NXG2 353 aaKnown RBP18.29■□□□□ 0.52
PKD1-221ENST00000488185 EDARQ9UNE0 448 aa18.29■□□□□ 0.52
PKD1-221ENST00000488185 OPN1LWP04000 364 aa18.28■□□□□ 0.52
PKD1-221ENST00000488185 GSNP06396 782 aa18.28■□□□□ 0.52
PKD1-221ENST00000488185 UBTFL6P0CB48 400 aaPredicted RBP18.28■□□□□ 0.52
PKD1-221ENST00000488185 SFTPDP35247 375 aa18.28■□□□□ 0.52
PKD1-221ENST00000488185 UGT2B10P36537 528 aa18.28■□□□□ 0.52
PKD1-221ENST00000488185 RNF144AP50876 292 aaPredicted RBP18.28■□□□□ 0.52
PKD1-221ENST00000488185 SESN3P58005 492 aa18.28■□□□□ 0.52
PKD1-221ENST00000488185 SIRPAP78324 504 aa18.28■□□□□ 0.52
PKD1-221ENST00000488185 PLAURQ03405 335 aa18.28■□□□□ 0.52
PKD1-221ENST00000488185 SYPL1Q16563 259 aa18.28■□□□□ 0.52
PKD1-221ENST00000488185 TMEM176BQ3YBM2 270 aaPredicted RBP18.28■□□□□ 0.52
PKD1-221ENST00000488185 TIGD2Q4W5G0 525 aa18.28■□□□□ 0.52
PKD1-221ENST00000488185 GPAT3Q53EU6 434 aa18.28■□□□□ 0.52
PKD1-221ENST00000488185 C3orf33Q6P1S2 294 aa18.28■□□□□ 0.52
PKD1-221ENST00000488185 CDC20BQ86Y33 519 aa18.28■□□□□ 0.52
PKD1-221ENST00000488185 SLC43A2Q8N370 569 aa18.28■□□□□ 0.52
PKD1-221ENST00000488185 TMCO5AQ8N6Q1 288 aa18.28■□□□□ 0.52
PKD1-221ENST00000488185 ANKFN1Q8N957 763 aa18.28■□□□□ 0.52
PKD1-221ENST00000488185 COQ10BQ9H8M1 238 aa18.28■□□□□ 0.52
PKD1-221ENST00000488185 GMEB1Q9Y692 573 aa18.28■□□□□ 0.52
PKD1-221ENST00000488185 DSPPQ9NZW4 1301 aa18.27■□□□□ 0.52
PKD1-221ENST00000488185 HIVEP1P15822 2718 aa18.27■□□□□ 0.52
PKD1-221ENST00000488185 C16orf97H3BN30 126 aa18.27■□□□□ 0.52
PKD1-221ENST00000488185 FAAHO00519 579 aa18.27■□□□□ 0.52
PKD1-221ENST00000488185 SNX3O60493 162 aa18.27■□□□□ 0.52
PKD1-221ENST00000488185 PLGP00747 810 aaPredicted RBP18.27■□□□□ 0.52
PKD1-221ENST00000488185 HRGP04196 525 aa18.27■□□□□ 0.52
PKD1-221ENST00000488185 CHRM4P08173 479 aa18.27■□□□□ 0.52
PKD1-221ENST00000488185 CPOXP36551 454 aa18.27■□□□□ 0.52
PKD1-221ENST00000488185 APOBEC1P41238 236 aaKnown RBP18.27■□□□□ 0.52
PKD1-221ENST00000488185 CLK1P49759 484 aaKnown RBP18.27■□□□□ 0.52
PKD1-221ENST00000488185 CTBP2P56545 445 aa18.27■□□□□ 0.52
PKD1-221ENST00000488185 MAPK11Q15759 364 aa18.27■□□□□ 0.52
PKD1-221ENST00000488185 COX20Q5RI15 118 aa18.27■□□□□ 0.52
PKD1-221ENST00000488185 PLEKHM3Q6ZWE6 761 aa18.27■□□□□ 0.52
PKD1-221ENST00000488185 OR9I1Q8NGQ6 314 aa18.27■□□□□ 0.52
PKD1-221ENST00000488185 SLC25A43Q8WUT9 341 aaPredicted RBP18.27■□□□□ 0.52
PKD1-221ENST00000488185 GTF2H4Q92759 462 aa18.27■□□□□ 0.52
PKD1-221ENST00000488185 TACO1Q9BSH4 297 aaKnown RBP18.27■□□□□ 0.52
PKD1-221ENST00000488185 CCDC106Q9BWC9 280 aa18.27■□□□□ 0.52
PKD1-221ENST00000488185 SRXN1Q9BYN0 137 aa18.27■□□□□ 0.52
PKD1-221ENST00000488185 TPT1P8Q9HAU6 139 aa18.27■□□□□ 0.52
PKD1-221ENST00000488185 SERINC1Q9NRX5 453 aa18.27■□□□□ 0.52
PKD1-221ENST00000488185 CCDC22O60826 627 aa18.26■□□□□ 0.51
PKD1-221ENST00000488185 SHOX2O60902 331 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms