RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 NPIPA7E9PJI5 369 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 LYRM1O43325 122 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 NPIPA8P0DM63 369 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 RNH1P13489 461 aaKnown RBP24.11■■□□□ 1.45
HLA-C-208ENST00000487245 CLDN20P56880 219 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 TAS2R43P59537 309 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 PPP1CAP62136 330 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 FOXK2Q01167 660 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 PRTGQ2VWP7 1150 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 TIGD3Q6B0B8 471 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 NOXA1Q86UR1 476 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 GPALPP1Q8IXQ4 340 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 OR9A4Q8NGU2 314 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 SLC2A12Q8TD20 617 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 BPIFA2Q96DR5 249 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 PTP4A3O75365 173 aa24.1■■□□□ 1.45
HLA-C-208ENST00000487245 C1orf61Q13536 156 aa24.1■■□□□ 1.45
HLA-C-208ENST00000487245 INSL4Q14641 139 aa24.1■■□□□ 1.45
HLA-C-208ENST00000487245 ZNF761Q86XN6 746 aaPredicted RBP24.1■■□□□ 1.45
HLA-C-208ENST00000487245 SLC37A3Q8NCC5 494 aa24.1■■□□□ 1.45
HLA-C-208ENST00000487245 DMRTB1Q96MA1 342 aa24.1■■□□□ 1.45
HLA-C-208ENST00000487245 ENKD1Q9H0I2 346 aa24.1■■□□□ 1.45
HLA-C-208ENST00000487245 MARCH7Q9H992 704 aa24.1■■□□□ 1.45
HLA-C-208ENST00000487245 ATP13A2Q9NQ11 1180 aa24.1■■□□□ 1.45
HLA-C-208ENST00000487245 HAO2Q9NYQ3 351 aa24.1■■□□□ 1.45
HLA-C-208ENST00000487245 SLC35A3Q9Y2D2 325 aa24.1■■□□□ 1.45
HLA-C-208ENST00000487245 A8MV72 311 aaPredicted RBP24.09■■□□□ 1.45
HLA-C-208ENST00000487245 PRR23D1E9PI22 279 aaPredicted RBP24.09■■□□□ 1.45
HLA-C-208ENST00000487245 PLPP2O43688 288 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 MT-ND5P03915 603 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 PRR23D2P0DMB1 279 aaPredicted RBP24.09■■□□□ 1.45
HLA-C-208ENST00000487245 ALAS2P22557 587 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 BMP8BP34820 402 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 ZNF438Q7Z4V0 828 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 BMP8AQ7Z5Y6 402 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 TPRA1Q86W33 373 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 OR5W2Q8NH69 310 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 PTP4A1Q93096 173 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 MED20Q9H944 212 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 FOLH1BQ9HBA9 442 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 CENPBD1B2RD01 187 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 SLC43A1O75387 559 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 S1PR1P21453 382 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 SLC2A5P22732 501 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 LRRC28Q86X40 367 aaPredicted RBP24.09■■□□□ 1.45
HLA-C-208ENST00000487245 OR5M3Q8NGP4 307 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 TEAD3Q99594 435 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 MARVELD1Q9BSK0 173 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 TRAF4Q9BUZ4 470 aaPredicted RBP24.09■■□□□ 1.45
HLA-C-208ENST00000487245 HCAR1Q9BXC0 346 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 TRIM2Q9C040 744 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 RANGRFQ9HD47 186 aaPredicted RBP24.09■■□□□ 1.45
HLA-C-208ENST00000487245 CYSLTR2Q9NS75 346 aa24.09■■□□□ 1.45
HLA-C-208ENST00000487245 ST6GALNAC1Q9NSC7 600 aaPredicted RBP24.09■■□□□ 1.45
HLA-C-208ENST00000487245 SCN2AQ99250 2005 aa24.08■■□□□ 1.45
HLA-C-208ENST00000487245 CHP2O43745 196 aa24.08■■□□□ 1.45
HLA-C-208ENST00000487245 CTNSO60931 367 aa24.08■■□□□ 1.45
HLA-C-208ENST00000487245 RBM34P42696 430 aaKnown RBP24.08■■□□□ 1.45
HLA-C-208ENST00000487245 THSD4Q6ZMP0 1018 aa24.08■■□□□ 1.45
HLA-C-208ENST00000487245 ZNF595Q8IYB9 648 aa24.08■■□□□ 1.45
HLA-C-208ENST00000487245 NDC1Q9BTX1 674 aa24.08■■□□□ 1.45
HLA-C-208ENST00000487245 SLA2Q9H6Q3 261 aa24.08■■□□□ 1.45
HLA-C-208ENST00000487245 MALT1Q9UDY8 824 aa24.08■■□□□ 1.45
HLA-C-208ENST00000487245 B4DGG1 531 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 HRO43593 1189 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 HCRTR1O43613 425 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 SCO2O43819 266 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 ELK1P19419 428 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 FUT1P19526 365 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 PLAURQ03405 335 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 NR2C2APQ86WQ0 139 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 SHISA5Q8N114 240 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 FRMD1Q8N878 549 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 OR13C2Q8NGS9 318 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 LILRB4Q8NHJ6 448 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 NACC2Q96BF6 587 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 TCTN2Q96GX1 697 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 RBM18Q96H35 190 aaKnown RBP24.07■■□□□ 1.44
HLA-C-208ENST00000487245 IFT27Q9BW83 186 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP24.07■■□□□ 1.44
HLA-C-208ENST00000487245 UCK1Q9HA47 277 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 A0A0B4J2E0 115 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 FAM240BA0A1B0GVZ2 78 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 A0A1B0GX12 115 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 RIIAD1A6NNX1 92 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 RFX3P48380 749 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 PSMD4P55036 377 aaKnown RBP24.07■■□□□ 1.44
HLA-C-208ENST00000487245 IGLV3-21P80748 117 aaPredicted RBP24.07■■□□□ 1.44
HLA-C-208ENST00000487245 STX4Q12846 297 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 TATDN3Q17R31 274 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 DEFB110Q30KQ9 67 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 CHCHD2P9Q5T1J5 151 aaPredicted RBP24.07■■□□□ 1.44
HLA-C-208ENST00000487245 COL13A1Q5TAT6 717 aaPredicted RBP24.07■■□□□ 1.44
HLA-C-208ENST00000487245 B3GLCTQ6Y288 498 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 DGAT2L6Q6ZPD8 337 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 SYT13Q7L8C5 426 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 TEX19Q8NA77 164 aa24.07■■□□□ 1.44
HLA-C-208ENST00000487245 NLGN4YQ8NFZ3 816 aaPredicted RBP24.07■■□□□ 1.44
HLA-C-208ENST00000487245 CNOT9Q92600 299 aaKnown RBP24.07■■□□□ 1.44
HLA-C-208ENST00000487245 RIT1Q92963 219 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms