RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 KIR3DX1Q9H7L2 352 aa12.48□□□□□ -0.41
HDLBP-241ENST00000487169 TBC1D29Q9UFV1 150 aa12.48□□□□□ -0.41
HDLBP-241ENST00000487169 ICKQ9UPZ9 632 aa12.48□□□□□ -0.41
HDLBP-241ENST00000487169 SLC5A10A0PJK1 596 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 MEN1O00255 615 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 MPIG6BO95866 241 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 REEP5Q00765 189 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 ZFP90Q8TF47 636 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 NANOS1Q8WY41 292 aaKnown RBP12.47□□□□□ -0.41
HDLBP-241ENST00000487169 COL24A1Q17RW2 1714 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 CAPNS1P04632 268 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 PBX2P40425 430 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 RAB40BQ12829 278 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 SMN1Q16637 294 aaKnown RBP12.47□□□□□ -0.41
HDLBP-241ENST00000487169 PGGHGQ32M88 737 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 ZNF322Q6U7Q0 402 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-241ENST00000487169 Q6ZPB1 254 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-241ENST00000487169 FAM83HQ6ZRV2 1179 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-241ENST00000487169 ZNF350Q9GZX5 532 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 OR51E2Q9H255 320 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 OR2S2Q9NQN1 319 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 MYEF2Q9P2K5 600 aaKnown RBP12.47□□□□□ -0.41
HDLBP-241ENST00000487169 PADI1Q9ULC6 663 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 B3GNT3Q9Y2A9 372 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 HS3ST3A1Q9Y663 406 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 AP1G1O43747 822 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 DCNP07585 359 aaKnown RBP12.47□□□□□ -0.41
HDLBP-241ENST00000487169 CHRM4P08173 479 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 CSNK2A1P68400 391 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-241ENST00000487169 DCDP81605 110 aaKnown RBP12.47□□□□□ -0.41
HDLBP-241ENST00000487169 STK11Q15831 433 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 PATE1Q8WXA2 126 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 ZNF775Q96BV0 537 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-241ENST00000487169 LYSMD1Q96S90 227 aa12.47□□□□□ -0.41
HDLBP-241ENST00000487169 DRD5P21918 477 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 UQCRC1P31930 480 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 ACVR1Q04771 509 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 TMEM176BQ3YBM2 270 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-241ENST00000487169 TMEM201Q5SNT2 666 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 DCAF12Q5T6F0 453 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 GPR139Q6DWJ6 353 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 AWAT2Q6E213 333 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 MAVSQ7Z434 540 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 SLC16A11Q8NCK7 471 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 OR5W2Q8NH69 310 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 OR14A16Q8NHC5 309 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 ISL2Q96A47 359 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 TM4SF18Q96CE8 201 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 MYEOVQ96EZ4 313 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 SEMA6CQ9H3T2 930 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 TUBB1Q9H4B7 451 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 SYNPO2LQ9H987 977 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 ENY2Q9NPA8 101 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 RLIMQ9NVW2 624 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 TESQ9UGI8 421 aaKnown RBP12.46□□□□□ -0.41
HDLBP-241ENST00000487169 NCOR1O75376 2440 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 SLC33A1O00400 549 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-241ENST00000487169 TSPAN9O75954 239 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 PRSS3P35030 304 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 CCR2P41597 374 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 HTR3AP46098 478 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 ZNF91Q05481 1191 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 C6orf183Q5T699 404 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 BORAQ6PGQ7 559 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 LRRC20Q8TCA0 184 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 C17orf50Q8WW18 174 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 AMDHD1Q96NU7 426 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 FOXN4Q96NZ1 517 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 MKRN2Q9H000 416 aaKnown RBP12.46□□□□□ -0.41
HDLBP-241ENST00000487169 OR10A5Q9H207 317 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 ZNF337Q9Y3M9 751 aa12.46□□□□□ -0.41
HDLBP-241ENST00000487169 KDM4EB2RXH2 506 aaPredicted RBP12.46□□□□□ -0.42
HDLBP-241ENST00000487169 OR7A10O76100 309 aa12.46□□□□□ -0.42
HDLBP-241ENST00000487169 KCNK5O95279 499 aa12.46□□□□□ -0.42
HDLBP-241ENST00000487169 ICAM2P13598 275 aa12.46□□□□□ -0.42
HDLBP-241ENST00000487169 POU3F2P20265 443 aaPredicted RBP12.46□□□□□ -0.42
HDLBP-241ENST00000487169 DNASE1P24855 282 aa12.46□□□□□ -0.42
HDLBP-241ENST00000487169 ACTBP60709 375 aa12.46□□□□□ -0.42
HDLBP-241ENST00000487169 ACTG1P63261 375 aa12.46□□□□□ -0.42
HDLBP-241ENST00000487169 ZNF181Q2M3W8 571 aa12.46□□□□□ -0.42
HDLBP-241ENST00000487169 ACSM3Q53FZ2 586 aa12.46□□□□□ -0.42
HDLBP-241ENST00000487169 NKAIN2Q5VXU1 208 aa12.46□□□□□ -0.42
HDLBP-241ENST00000487169 RAB12Q6IQ22 244 aa12.46□□□□□ -0.42
HDLBP-241ENST00000487169 BAIAP2L2Q6UXY1 529 aa12.46□□□□□ -0.42
HDLBP-241ENST00000487169 PIWIL3Q7Z3Z3 882 aaKnown RBP12.46□□□□□ -0.42
HDLBP-241ENST00000487169 TM9SF4Q92544 642 aa12.46□□□□□ -0.42
HDLBP-241ENST00000487169 GPN2Q9H9Y4 310 aaPredicted RBP12.46□□□□□ -0.42
HDLBP-241ENST00000487169 PDFQ9HBH1 243 aa12.46□□□□□ -0.42
HDLBP-241ENST00000487169 MEPEQ9NQ76 525 aaPredicted RBP12.46□□□□□ -0.42
HDLBP-241ENST00000487169 TAS2R8Q9NYW2 309 aa12.46□□□□□ -0.42
HDLBP-241ENST00000487169 ZNF175Q9Y473 711 aa12.46□□□□□ -0.42
HDLBP-241ENST00000487169 PHIPQ8WWQ0 1821 aa12.46□□□□□ -0.42
HDLBP-241ENST00000487169 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.46□□□□□ -0.42
HDLBP-241ENST00000487169 FUOMA2VDF0 154 aa12.46□□□□□ -0.42
HDLBP-241ENST00000487169 TTLL8A6PVC2 850 aa12.46□□□□□ -0.42
HDLBP-241ENST00000487169 H7C417 338 aa12.46□□□□□ -0.42
HDLBP-241ENST00000487169 NARSO43776 548 aaKnown RBP12.46□□□□□ -0.42
HDLBP-241ENST00000487169 H2AFB2P0C5Z0 115 aa12.46□□□□□ -0.42
HDLBP-241ENST00000487169 HOXB9P17482 250 aaPredicted RBP12.46□□□□□ -0.42
HDLBP-241ENST00000487169 CHMP24386 653 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms