RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 SLC36A3Q495N2 470 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 TMEM52BQ4KMG9 183 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 SLC22A6Q4U2R8 563 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 HSD11B1LQ7Z5J1 315 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 SPEM1Q8N4L4 309 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 ZBED3Q96IU2 234 aaPredicted RBP3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 AKR1E2Q96JD6 320 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 RAB33BQ9H082 229 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 IMPAD1Q9NX62 359 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 CLEC5AQ9NY25 188 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 AATFQ9NY61 560 aaKnown RBP eCLIP3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 ATAD5Q96QE3 1844 aa3.85□□□□□ -1.79
PRPF38A-203ENST00000487160 DOCK1Q14185 1865 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 CLRN2A0PK11 232 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 EFCAB7A8K855 629 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 G3V3Y1 287 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 RAMP1O60894 148 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 STX11O75558 287 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 RHBDL1O75783 438 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 CLUP10909 449 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 UMPSP11172 480 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 H2AFXP16104 143 aaPredicted RBP3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 ATP6V1C1P21283 382 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 HNRNPA2B1P22626 353 aaKnown RBP3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 RPL4P36578 427 aaKnown RBP3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 MAGEA5P43359 124 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 NOVA1P51513 510 aaKnown RBP3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 ARFIP1P53367 373 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 PRMT2P55345 433 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 EIPR1Q53HC9 387 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 TCTEX1D4Q5JR98 221 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 LGSNQ5TDP6 509 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 STAC2Q6ZMT1 411 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 ZDHHC21Q8IVQ6 265 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 RAET1EQ8TD07 263 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 TRIM44Q96DX7 344 aaPredicted RBP3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 CFAP53Q96M91 514 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 ERP44Q9BS26 406 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 HCAR1Q9BXC0 346 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 TMEM117Q9H0C3 514 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 POLR3FQ9H1D9 316 aaPredicted RBP3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 CUTCQ9NTM9 273 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 GMPPBQ9Y5P6 360 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 REV3LO60673 3130 aa3.84□□□□□ -1.79
PRPF38A-203ENST00000487160 GBF1Q92538 1859 aa3.84□□□□□ -1.8
PRPF38A-203ENST00000487160 A0A087WWV3 80 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 ESYT2A0FGR8 921 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 CLDN5O00501 218 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 XPO1O14980 1071 aaKnown RBP3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 OR1F1O43749 312 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 LAMP1P11279 417 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 PAX7P23759 505 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 PSMA5P28066 241 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 ADSSP30520 456 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 CDH5P33151 784 aaPredicted RBP3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 ACVR1BP36896 505 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 IFNAR2P48551 515 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 RPL34P49207 117 aaKnown RBP3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 PUDPQ08623 228 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 RUNX3Q13761 415 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 VGLL4Q14135 290 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 CAMK4Q16566 473 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 ANKDD1AQ495B1 522 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 HIGD2BQ4VC39 106 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 CELF3Q5SZQ8 465 aaKnown RBP3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 MEDAGQ5VYS4 303 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 ZNF57Q68EA5 555 aaPredicted RBP3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 SCYL2Q6P3W7 929 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 BLOC1S2Q6QNY1 142 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 LRRC70Q7Z2Q7 622 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 DPY19L4Q7Z388 723 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 ANKRD37Q7Z713 158 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 NAXDQ8IW45 347 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 BPIFB2Q8N4F0 458 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 CNIH3Q8TBE1 160 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 NANPQ8TBE9 248 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 AGAP11Q8TF27 550 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 OSTF1Q92882 214 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 FAM122AQ96E09 287 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 C1orf147Q96MC9 270 aaPredicted RBP3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 RANBP9Q96S59 729 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 EXOSC3Q9NQT5 275 aaKnown RBP3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 SNX6Q9UNH7 406 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 SMC3Q9UQE7 1217 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 CSAG2Q9Y5P2 127 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 RALGAPA1Q6GYQ0 2036 aa3.83□□□□□ -1.8
PRPF38A-203ENST00000487160 HCFC1P51610 2035 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 RLFQ13129 1914 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 LOC285556D6RIA3 1793 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 PPIAL4CA0A0B4J2A2 164 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 A8MUI8 341 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 CTAGE5O15320 804 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 STX7O15400 261 aaKnown RBP3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 EFNA2O43921 213 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 GPRIN2O60269 458 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 ZNF354AO60765 605 aaPredicted RBP3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 TM7SF2O76062 418 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 B3GAT3O94766 335 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 GJB5O95377 273 aa3.82□□□□□ -1.8
PRPF38A-203ENST00000487160 CT45A10P0DMU9 189 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms