RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 FUT5Q11128 374 aa17.02■□□□□ 0.32
CLIP2-206ENST00000487091 TIGD2Q4W5G0 525 aa17.02■□□□□ 0.32
CLIP2-206ENST00000487091 TMEM201Q5SNT2 666 aa17.02■□□□□ 0.32
CLIP2-206ENST00000487091 C3orf33Q6P1S2 294 aa17.02■□□□□ 0.32
CLIP2-206ENST00000487091 FCRLAQ7L513 359 aa17.02■□□□□ 0.32
CLIP2-206ENST00000487091 OLIG3Q7RTU3 272 aa17.02■□□□□ 0.32
CLIP2-206ENST00000487091 ZNF619Q8N2I2 560 aa17.02■□□□□ 0.32
CLIP2-206ENST00000487091 GLB1L3Q8NCI6 653 aaPredicted RBP17.02■□□□□ 0.32
CLIP2-206ENST00000487091 FAM71CQ8NEG0 241 aa17.02■□□□□ 0.32
CLIP2-206ENST00000487091 MGARPQ8TDB4 240 aa17.02■□□□□ 0.32
CLIP2-206ENST00000487091 TLCD1Q96CP7 247 aa17.02■□□□□ 0.32
CLIP2-206ENST00000487091 ZC3HAV1LQ96H79 300 aaKnown RBP17.02■□□□□ 0.32
CLIP2-206ENST00000487091 ZBTB18Q99592 522 aa17.02■□□□□ 0.32
CLIP2-206ENST00000487091 TACO1Q9BSH4 297 aaKnown RBP17.02■□□□□ 0.32
CLIP2-206ENST00000487091 WDR55Q9H6Y2 383 aaPredicted RBP17.02■□□□□ 0.32
CLIP2-206ENST00000487091 SERINC1Q9NRX5 453 aa17.02■□□□□ 0.32
CLIP2-206ENST00000487091 ACER3Q9NUN7 267 aa17.02■□□□□ 0.32
CLIP2-206ENST00000487091 NKIRAS1Q9NYS0 192 aa17.02■□□□□ 0.32
CLIP2-206ENST00000487091 KLHL13Q9P2N7 655 aa17.02■□□□□ 0.32
CLIP2-206ENST00000487091 FREM1Q5H8C1 2179 aa17.02■□□□□ 0.31
CLIP2-206ENST00000487091 THBDP07204 575 aa17.01■□□□□ 0.31
CLIP2-206ENST00000487091 UBTFL6P0CB48 400 aaPredicted RBP17.01■□□□□ 0.31
CLIP2-206ENST00000487091 LOXP28300 417 aaPredicted RBP17.01■□□□□ 0.31
CLIP2-206ENST00000487091 EPHA3P29320 983 aa17.01■□□□□ 0.31
CLIP2-206ENST00000487091 ANXA11P50995 505 aaKnown RBP17.01■□□□□ 0.31
CLIP2-206ENST00000487091 BEND6Q5SZJ8 279 aaPredicted RBP17.01■□□□□ 0.31
CLIP2-206ENST00000487091 FRRS1Q6ZNA5 592 aa17.01■□□□□ 0.31
CLIP2-206ENST00000487091 TUSC5Q8IXB3 177 aa17.01■□□□□ 0.31
CLIP2-206ENST00000487091 MAELQ96JY0 434 aaKnown RBP17.01■□□□□ 0.31
CLIP2-206ENST00000487091 OR52E6Q96RD3 313 aa17.01■□□□□ 0.31
CLIP2-206ENST00000487091 PANX1Q96RD7 426 aa17.01■□□□□ 0.31
CLIP2-206ENST00000487091 PIP5K1AQ99755 562 aa17.01■□□□□ 0.31
CLIP2-206ENST00000487091 C12orf49Q9H741 205 aa17.01■□□□□ 0.31
CLIP2-206ENST00000487091 MANSC1Q9H8J5 431 aa17.01■□□□□ 0.31
CLIP2-206ENST00000487091 TMBIM4Q9HC24 238 aa17.01■□□□□ 0.31
CLIP2-206ENST00000487091 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.01■□□□□ 0.31
CLIP2-206ENST00000487091 LIPT1Q9Y234 373 aa17.01■□□□□ 0.31
CLIP2-206ENST00000487091 ARID1AO14497 2285 aa17■□□□□ 0.31
CLIP2-206ENST00000487091 GOLGA8QA0A0J9YX86 632 aa17■□□□□ 0.31
CLIP2-206ENST00000487091 PRAMEF27A3QJZ7 478 aa17■□□□□ 0.31
CLIP2-206ENST00000487091 GOLGA8OA6NCC3 632 aa17■□□□□ 0.31
CLIP2-206ENST00000487091 GOLGA8NF8WBI6 632 aa17■□□□□ 0.31
CLIP2-206ENST00000487091 HMGN4O00479 90 aa17■□□□□ 0.31
CLIP2-206ENST00000487091 YES1P07947 543 aa17■□□□□ 0.31
CLIP2-206ENST00000487091 ROS1P08922 2347 aa17■□□□□ 0.31
CLIP2-206ENST00000487091 KITP10721 976 aa17■□□□□ 0.31
CLIP2-206ENST00000487091 FPR1P21462 350 aa17■□□□□ 0.31
CLIP2-206ENST00000487091 HOXC12P31275 282 aa17■□□□□ 0.31
CLIP2-206ENST00000487091 KCNJ10P78508 379 aa17■□□□□ 0.31
CLIP2-206ENST00000487091 HPCAP84074 193 aa17■□□□□ 0.31
CLIP2-206ENST00000487091 FOXD4Q12950 439 aaPredicted RBP17■□□□□ 0.31
CLIP2-206ENST00000487091 GPAT3Q53EU6 434 aa17■□□□□ 0.31
CLIP2-206ENST00000487091 CXorf67Q86X51 503 aaPredicted RBP17■□□□□ 0.31
CLIP2-206ENST00000487091 ZG16BQ96DA0 208 aa17■□□□□ 0.31
CLIP2-206ENST00000487091 TRNT1Q96Q11 434 aaKnown RBP17■□□□□ 0.31
CLIP2-206ENST00000487091 HDHD5Q9BXW7 423 aa17■□□□□ 0.31
CLIP2-206ENST00000487091 EXOSC3Q9NQT5 275 aaKnown RBP17■□□□□ 0.31
CLIP2-206ENST00000487091 KLHL9Q9P2J3 617 aa17■□□□□ 0.31
CLIP2-206ENST00000487091 PRR14LQ5THK1 2151 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 A0A1W2PNR3 127 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 KLF4O43474 513 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 H6PDO95479 791 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 IL6P05231 212 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 IDO1P14902 403 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 FOSL1P15407 271 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 ENPP1P22413 925 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 APOBEC1P41238 236 aaKnown RBP16.99■□□□□ 0.31
CLIP2-206ENST00000487091 MAGEA8P43361 318 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 CHRNEQ04844 493 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 MERTKQ12866 999 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 ACKR1Q16570 336 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 PDCD4Q53EL6 469 aaKnown RBP16.99■□□□□ 0.31
CLIP2-206ENST00000487091 BEX5Q5H9J7 111 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 TFAP2EQ6VUC0 442 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 ZNF621Q6ZSS3 439 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 PLEKHM3Q6ZWE6 761 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 NUFIP2Q7Z417 695 aaKnown RBP16.99■□□□□ 0.31
CLIP2-206ENST00000487091 RNF130Q86XS8 419 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 GABRG1Q8N1C3 465 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 STEAP2Q8NFT2 490 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 SLC25A43Q8WUT9 341 aaPredicted RBP16.99■□□□□ 0.31
CLIP2-206ENST00000487091 PMM1Q92871 262 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 PIGTQ969N2 578 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 HS3ST6Q96QI5 342 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 INPP5KQ9BT40 448 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 ACTR6Q9GZN1 396 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 QRSL1Q9H0R6 528 aaKnown RBP16.99■□□□□ 0.31
CLIP2-206ENST00000487091 BCO1Q9HAY6 547 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 DSCAMO60469 2012 aa16.99■□□□□ 0.31
CLIP2-206ENST00000487091 ZNF469Q96JG9 3925 aaPredicted RBP16.98■□□□□ 0.31
CLIP2-206ENST00000487091 C9JVG2 144 aa16.98■□□□□ 0.31
CLIP2-206ENST00000487091 KLF11O14901 512 aa16.98■□□□□ 0.31
CLIP2-206ENST00000487091 CYTIPO60759 359 aa16.98■□□□□ 0.31
CLIP2-206ENST00000487091 SLC22A3O75751 556 aa16.98■□□□□ 0.31
CLIP2-206ENST00000487091 FKBP2P26885 142 aaKnown RBP16.98■□□□□ 0.31
CLIP2-206ENST00000487091 CDKN2CP42773 168 aa16.98■□□□□ 0.31
CLIP2-206ENST00000487091 GSTA3Q16772 222 aa16.98■□□□□ 0.31
CLIP2-206ENST00000487091 SHEQ5VZ18 495 aa16.98■□□□□ 0.31
CLIP2-206ENST00000487091 NXNQ6DKJ4 435 aa16.98■□□□□ 0.31
CLIP2-206ENST00000487091 C20orf204Q6ZNR8 217 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms