RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 IGLV3-27P01718 113 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 APOEP02649 317 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 PCCBP05166 539 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 RHOXF2BP0C7M4 288 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 PATE4P0C8F1 98 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 GABRR2P28476 465 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 HOXA9P31269 272 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 GPR183P32249 361 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 ID1P41134 155 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 OPRL1P41146 370 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 TSFMP43897 325 aaKnown RBP3.43□□□□□ -1.86
PTCD3-216ENST00000487043 ABCE1P61221 599 aaKnown RBP3.43□□□□□ -1.86
PTCD3-216ENST00000487043 RPL27P61353 136 aaKnown RBP3.43□□□□□ -1.86
PTCD3-216ENST00000487043 SLC7A9P82251 487 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 DHODHQ02127 395 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 RBBP4Q09028 425 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 XRCC4Q13426 336 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 PAFAH1B3Q15102 231 aaKnown RBP3.43□□□□□ -1.86
PTCD3-216ENST00000487043 FAM189A2Q15884 450 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 ADPRMQ3LIE5 342 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 ZNF528Q3MIS6 628 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 MS4A13Q5J8X5 152 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 PPM1LQ5SGD2 360 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 C10orf120Q5SQS8 335 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 FAM72AQ5TYM5 149 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 FAM72DQ6L9T8 149 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 KIAA1161Q6NSJ0 714 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 PWWP2BQ6NUJ5 590 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 C8orf74Q6P047 294 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 BHLHB9Q6PI77 547 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 FIP1L1Q6UN15 594 aaKnown RBP3.43□□□□□ -1.86
PTCD3-216ENST00000487043 BZW1Q7L1Q6 419 aaKnown RBP3.43□□□□□ -1.86
PTCD3-216ENST00000487043 ASRGL1Q7L266 308 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 FAM72BQ86X60 149 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 DCUN1D3Q8IWE4 304 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 TBC1D21Q8IYX1 336 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 LINC00518Q8N0U6 118 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 ATP6V0D2Q8N8Y2 350 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 EIF1ADQ8N9N8 165 aaKnown RBP3.43□□□□□ -1.86
PTCD3-216ENST00000487043 ACTL9Q8TC94 416 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 ARNTL2Q8WYA1 636 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.43□□□□□ -1.86
PTCD3-216ENST00000487043 MRPS31Q92665 395 aaKnown RBP3.43□□□□□ -1.86
PTCD3-216ENST00000487043 SLCO2A1Q92959 643 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 MCHR2Q969V1 340 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 NCLNQ969V3 563 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 RBM18Q96H35 190 aaKnown RBP3.43□□□□□ -1.86
PTCD3-216ENST00000487043 BTN2A3PQ96KV6 586 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 CSPG4P5Q96PW8 444 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 MYCBPQ99417 103 aaPredicted RBP3.43□□□□□ -1.86
PTCD3-216ENST00000487043 RHOXF2Q9BQY4 288 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 ERP44Q9BS26 406 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 FICDQ9BVA6 458 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 TPPP3Q9BW30 176 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 CLEC7AQ9BXN2 247 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 HOXD1Q9GZZ0 328 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 PRO3102Q9H379 93 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 PLEKHA3Q9HB20 300 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 SDF2L1Q9HCN8 221 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 KLK11Q9UBX7 282 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 MIOXQ9UGB7 285 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 BAIAP2L1Q9UHR4 511 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 LAMP5Q9UJQ1 280 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 CHMP2BQ9UQN3 213 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 SLC6A5Q9Y345 797 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 MFHAS1Q9Y4C4 1052 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 CSNK1G3Q9Y6M4 447 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 MYO16Q9Y6X6 1858 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 CLUHO75153 1309 aa3.43□□□□□ -1.86
PTCD3-216ENST00000487043 IGLV3-10A0A075B6K4 115 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 GOLGA6L7A0A1B0GV03 622 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 BCLAF3A2AJT9 711 aaKnown RBP3.42□□□□□ -1.86
PTCD3-216ENST00000487043 EPOPA6NHQ4 379 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 HACD1B0YJ81 288 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 E9PAM4 449 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 NPIPB9F8W1W9 429 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 MCF2LO15068 1137 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 ARPC1BO15143 372 aaKnown RBP3.42□□□□□ -1.86
PTCD3-216ENST00000487043 CCL16O15467 120 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 ZNF189O75820 626 aaPredicted RBP3.42□□□□□ -1.86
PTCD3-216ENST00000487043 APBB3O95704 486 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 CLDN1O95832 211 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 KRT14P02533 472 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 KRT6BP04259 564 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 CALCBP10092 127 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 H2AFXP16104 143 aaPredicted RBP3.42□□□□□ -1.86
PTCD3-216ENST00000487043 GNB3P16520 340 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 CEBPBP17676 345 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 PTPN4P29074 926 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 SOX6P35712 828 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 MMP12P39900 470 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 KRT6CP48668 564 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 VCPP55072 806 aaKnown RBP3.42□□□□□ -1.86
PTCD3-216ENST00000487043 TPI1P60174 286 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 EIF3EP60228 445 aaKnown RBP3.42□□□□□ -1.86
PTCD3-216ENST00000487043 DYNLT1P63172 113 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 MRPS25P82663 173 aaKnown RBP3.42□□□□□ -1.86
PTCD3-216ENST00000487043 CDKL1Q00532 357 aa3.42□□□□□ -1.86
PTCD3-216ENST00000487043 OTUD4Q01804 1114 aaKnown RBP3.42□□□□□ -1.86
PTCD3-216ENST00000487043 GBE1Q04446 702 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms