RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 LDB3O75112 727 aa11.49□□□□□ -0.57
HSPG2-211ENST00000486901 IFNA7P01567 189 aa11.49□□□□□ -0.57
HSPG2-211ENST00000486901 SLC35G4P0C7Q5 338 aa11.49□□□□□ -0.57
HSPG2-211ENST00000486901 DCTDP32321 178 aa11.49□□□□□ -0.57
HSPG2-211ENST00000486901 TRMT12Q53H54 448 aaKnown RBP11.49□□□□□ -0.57
HSPG2-211ENST00000486901 GPR139Q6DWJ6 353 aa11.49□□□□□ -0.57
HSPG2-211ENST00000486901 FCRLAQ7L513 359 aa11.49□□□□□ -0.57
HSPG2-211ENST00000486901 LIX1LQ8IVB5 337 aa11.49□□□□□ -0.57
HSPG2-211ENST00000486901 ACOT11Q8WXI4 607 aaPredicted RBP11.49□□□□□ -0.57
HSPG2-211ENST00000486901 RBPMSQ93062 196 aaKnown RBP11.49□□□□□ -0.57
HSPG2-211ENST00000486901 SORCS2Q96PQ0 1159 aa11.49□□□□□ -0.57
HSPG2-211ENST00000486901 C20orf85Q9H1P6 137 aa11.49□□□□□ -0.57
HSPG2-211ENST00000486901 MAN2B1O00754 1011 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 HOXA2O43364 376 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 APOC3P02656 99 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 MAZP56270 477 aaKnown RBP11.48□□□□□ -0.57
HSPG2-211ENST00000486901 DCUN1D3Q8IWE4 304 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 MEIOBQ8N635 442 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 FAM98AQ8NCA5 519 aaKnown RBP11.48□□□□□ -0.57
HSPG2-211ENST00000486901 GALNT6Q8NCL4 622 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 OR7G2Q8NG99 324 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 OR52L1Q8NGH7 329 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 SMPDL3BQ92485 455 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 NARS2Q96I59 477 aaKnown RBP11.48□□□□□ -0.57
HSPG2-211ENST00000486901 FOXN4Q96NZ1 517 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 MNTQ99583 582 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 TEAD3Q99594 435 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 SPATA5L1Q9BVQ7 753 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 KCNK15Q9H427 330 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 SIDT1Q9NXL6 827 aaKnown RBP11.48□□□□□ -0.57
HSPG2-211ENST00000486901 ADAM18Q9Y3Q7 739 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 OR2W5A6NFC9 320 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 OTOL1A6NHN0 477 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-211ENST00000486901 SLC9A3R1O14745 358 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-211ENST00000486901 DOK2O60496 412 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 SPDEFO95238 335 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 TMIGD3P0DMS9 266 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-211ENST00000486901 LIPCP11150 499 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 OPCMLQ14982 345 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 DEFB134Q4QY38 66 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 BEX5Q5H9J7 111 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 FAM74A1Q5RGS3 127 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 MPP7Q5T2T1 576 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 NIPAL3Q6P499 406 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 CMTM4Q8IZR5 234 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 SLC39A11Q8N1S5 342 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 TNFRSF13CQ96RJ3 184 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 B3GNT4Q9C0J1 378 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 CHD9Q3L8U1 2897 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 L7N2F9 121 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 CXCL2P19875 107 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 ANXA11P50995 505 aaKnown RBP11.48□□□□□ -0.57
HSPG2-211ENST00000486901 SLC7A9P82251 487 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 PUS10Q3MIT2 529 aaKnown RBP11.48□□□□□ -0.57
HSPG2-211ENST00000486901 LHX8Q68G74 356 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 ARSKQ6UWY0 536 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 MEPCEQ7L2J0 689 aaKnown RBP11.48□□□□□ -0.57
HSPG2-211ENST00000486901 GRASPQ7Z6J2 395 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-211ENST00000486901 METTL3Q86U44 580 aaKnown RBP11.48□□□□□ -0.57
HSPG2-211ENST00000486901 OR52E2Q8NGJ4 325 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 OR8S1Q8NH09 359 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 INSM2Q96T92 566 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-211ENST00000486901 CD180Q99467 661 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 TSPAN10Q9H1Z9 355 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-211ENST00000486901 MBNL1Q9NR56 388 aaKnown RBP11.48□□□□□ -0.57
HSPG2-211ENST00000486901 MAB21L2Q9Y586 359 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 AP1M2Q9Y6Q5 423 aa11.48□□□□□ -0.57
HSPG2-211ENST00000486901 A0A0G2JK05 382 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 LRRC72A6NJI9 287 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 MT-ND5P03915 603 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 CSNK2A2P19784 350 aaPredicted RBP11.47□□□□□ -0.57
HSPG2-211ENST00000486901 ATP5A1P25705 553 aaKnown RBP11.47□□□□□ -0.57
HSPG2-211ENST00000486901 PLA2G7Q13093 441 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 ATXN7L3Q14CW9 347 aaPredicted RBP11.47□□□□□ -0.57
HSPG2-211ENST00000486901 EXOSC7Q15024 291 aaKnown RBP11.47□□□□□ -0.57
HSPG2-211ENST00000486901 NDUFAF6Q330K2 333 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 ATRAIDQ6UW56 229 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 IQCF2Q8IXL9 164 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 OR4E2Q8NGC2 313 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 OR6M1Q8NGM8 313 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 OR2L2Q8NH16 312 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 ZNRF4Q8WWF5 429 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 ST8SIA4Q92187 359 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 ZNF436Q9C0F3 470 aaPredicted RBP11.47□□□□□ -0.57
HSPG2-211ENST00000486901 IL20Q9NYY1 176 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 KNTC1P50748 2209 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 DENND4CQ5VZ89 1909 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 NOTCH4Q99466 2003 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 A0A1W2PPV9 198 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 OR6C74A6NCV1 312 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 UNC119BA6NIH7 251 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 ASGR2P07307 311 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 PRKACAP17612 351 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 HK1P19367 917 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 MPIP34949 423 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 AKR1C2P52895 323 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 FOXK2Q01167 660 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 AKR1C1Q04828 323 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 DUSP5Q16690 384 aa11.47□□□□□ -0.57
HSPG2-211ENST00000486901 LRRC37A5PQ49AS3 106 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms