RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 AASSQ9UDR5 926 aa10.66□□□□□ -0.7
PRKCB-207ENST00000486868 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.66□□□□□ -0.7
PRKCB-207ENST00000486868 NPFFR2Q9Y5X5 522 aa10.66□□□□□ -0.7
PRKCB-207ENST00000486868 NINQ8N4C6 2090 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 PRR33A8MZF0 331 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 CDC42EP2O14613 210 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 SURF4O15260 269 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 NDUFB5O43674 189 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 TLX2O43763 284 aaPredicted RBP10.65□□□□□ -0.7
PRKCB-207ENST00000486868 PRKYO43930 277 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 PIP5K1CO60331 668 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 CDC40O60508 579 aaKnown RBP eCLIP10.65□□□□□ -0.7
PRKCB-207ENST00000486868 PGCP20142 388 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 MAKP20794 623 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 SLC1A3P43003 542 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 GPR4P46093 362 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 GP2P55259 537 aaKnown RBP10.65□□□□□ -0.7
PRKCB-207ENST00000486868 PIGFQ07326 219 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 RAB40BQ12829 278 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 FOXD4Q12950 439 aaPredicted RBP10.65□□□□□ -0.7
PRKCB-207ENST00000486868 LSAMPQ13449 338 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 SYT14P1Q58G82 188 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 AADACL4Q5VUY2 407 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 NXNL2Q5VZ03 156 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 LCN10Q6JVE6 187 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 TMEM81Q6P7N7 255 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 SMARCD3Q6STE5 483 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 C5orf46Q6UWT4 87 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 ZNF367Q7RTV3 350 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 GLRX5Q86SX6 157 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 DND1Q8IYX4 353 aaKnown RBP10.65□□□□□ -0.7
PRKCB-207ENST00000486868 CACTIN-AS1Q8N1I8 211 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 OR5W2Q8NH69 310 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 PFN4Q8NHR9 129 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 M1APQ8TC57 530 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 ELP5Q8TE02 316 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 TMCO6Q96DC7 493 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 YIPF6Q96EC8 236 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 SGTBQ96EQ0 304 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 TMEM80Q96HE8 168 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 ZNF582Q96NG8 517 aaPredicted RBP10.65□□□□□ -0.7
PRKCB-207ENST00000486868 IL4I1Q96RQ9 567 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 PRRX2Q99811 253 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 DPH1Q9BZG8 443 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 TBL1XR1Q9BZK7 514 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 UBQLN3Q9H347 655 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 FGF20Q9NP95 211 aaPredicted RBP10.65□□□□□ -0.7
PRKCB-207ENST00000486868 WDR70Q9NW82 654 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 DIMT1Q9UNQ2 313 aaKnown RBP10.65□□□□□ -0.7
PRKCB-207ENST00000486868 LOXL2Q9Y4K0 774 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 R4GN57 208 aa10.65□□□□□ -0.7
PRKCB-207ENST00000486868 IGLV3-32A0A0A0MS00 114 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 FAM86C2PA6NEL3 165 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 BHLHE40O14503 412 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 IDH3BO43837 385 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 AHCYL1O43865 530 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 KLF7O75840 302 aaPredicted RBP10.64□□□□□ -0.71
PRKCB-207ENST00000486868 INMTO95050 263 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 GABARAPO95166 117 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 NADKO95544 446 aaPredicted RBP10.64□□□□□ -0.71
PRKCB-207ENST00000486868 DLGAP3O95886 979 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 STSP08842 583 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 DBTP11182 482 aaKnown RBP10.64□□□□□ -0.71
PRKCB-207ENST00000486868 ZNF28P17035 718 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 MSX1P28360 303 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 SLC6A6P31641 620 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 EVI2BP34910 448 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 HTR3AP46098 478 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 P2RX1P51575 399 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 MAP2K6P52564 334 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 ZNF91Q05481 1191 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 CBFBQ13951 182 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 PCOLCEQ15113 449 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 CSRP2Q16527 193 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 C3orf38Q5JPI3 329 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 GPR107Q5VW38 600 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 FAAH2Q6GMR7 532 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 PRR23CQ6ZRP0 262 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 GID4Q8IVV7 300 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 ARMC10Q8N2F6 343 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 CADM2Q8N3J6 435 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 IQCF1Q8N6M8 205 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 OR4Q3Q8NH05 313 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 OR6S1Q8NH40 331 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 FANK1Q8TC84 345 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 SLC22A8Q8TCC7 542 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 GRHL3Q8TE85 626 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 ZFAND2BQ8WV99 257 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 ATOH1Q92858 354 aaPredicted RBP10.64□□□□□ -0.71
PRKCB-207ENST00000486868 HGDQ93099 445 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 MR1Q95460 341 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 C12orf43Q96C57 262 aaKnown RBP10.64□□□□□ -0.71
PRKCB-207ENST00000486868 PLEKHA8Q96JA3 519 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 LRR1Q96L50 414 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 SAMD8Q96LT4 415 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 IMMP1LQ96LU5 166 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 COG8Q96MW5 612 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 GPX7Q96SL4 187 aaPredicted RBP10.64□□□□□ -0.71
PRKCB-207ENST00000486868 EDEM2Q9BV94 578 aa10.64□□□□□ -0.71
PRKCB-207ENST00000486868 JAM3Q9BX67 310 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms