RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 GLULP15104 373 aa16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 ZNF3P17036 446 aa16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 PTBP1P26599 531 aaKnown RBP eCLIP16.58■□□□□ 0.245e-12■■■■■ 40.8
PDLIM7-207ENST00000486828 NOS3P29474 1203 aa16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 SSTR4P31391 388 aa16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 MTNR1BP49286 362 aa16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 IGLV3-21P80748 117 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 STX4Q12846 297 aa16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 SMAD2Q15796 467 aaKnown RBP16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 ZNF141Q15928 474 aa16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 ALG10BQ5I7T1 473 aa16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 OAFQ86UD1 273 aa16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 RBM18Q96H35 190 aaKnown RBP16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 ART5Q96L15 291 aa16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 SLX1AQ9BQ83 275 aa16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 LRRC61Q9BV99 259 aa16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 PHF7Q9BWX1 381 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 GPR174Q9BXC1 333 aa16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 C11orf54Q9H0W9 315 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 OR51V1Q9H2C8 321 aa16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 SYNDIG1Q9H7V2 258 aa16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 MRPS33Q9Y291 106 aaKnown RBP16.58■□□□□ 0.24
PDLIM7-207ENST00000486828 A0A1W2PPC4 97 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 BLACEA4D250 179 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 SRPX2O60687 465 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 MT-ND5P03915 603 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 SBK2P0C263 348 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 PEPDP12955 493 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 IL9P15248 144 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 HK1P19367 917 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 CD53P19397 219 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 SLC6A6P31641 620 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 RPS5P46782 204 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 EVX1P49640 407 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 SLC16A1P53985 500 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 SKP1P63208 163 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 DAB2P98082 770 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 SRSF5Q13243 272 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 CRMP1Q14194 572 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 FGFBP1Q14512 234 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 ZSWIM7Q19AV6 140 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 FCRLBQ6BAA4 426 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 PTCRAQ6ISU1 281 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 RTL4Q6ZR62 310 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 Q6ZS52 159 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 OR5W2Q8NH69 310 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 KLHDC7BQ96G42 594 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 PEX11GQ96HA9 241 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 TNFRSF13CQ96RJ3 184 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 PHOX2BQ99453 314 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 NDC1Q9BTX1 674 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 ADGRL4Q9HBW9 690 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 MCCC2Q9HCC0 563 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 WSB2Q9NYS7 404 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 NDRG2Q9UN36 371 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 DTX4Q9Y2E6 619 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 SYNDIG1LA6NDD5 238 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 HRKO00198 91 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 DVL2O14641 736 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 FOXS1O43638 330 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 HLA-DQB1P01920 261 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 APEX1P27695 318 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 NUDT1P36639 197 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 FHL1Q13642 323 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 LCN1P1Q5VSP4 162 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 RSBN1Q5VWQ0 802 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 ARHGAP11AQ6P4F7 1023 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 NPSR1Q6W5P4 371 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 LINC00114Q6XXX2 140 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 ZNF550Q7Z398 422 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 GPALPP1Q8IXQ4 340 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 ZNF595Q8IYB9 648 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 OR6F1Q8NGZ6 308 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 SLC2A12Q8TD20 617 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 AHCYL2Q96HN2 611 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 DEPDC7Q96QD5 511 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 MOV10Q9HCE1 1003 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 HAO2Q9NYQ3 351 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 SLCO1B1Q9Y6L6 691 aa16.57■□□□□ 0.24
PDLIM7-207ENST00000486828 A0A0C4DFX4 3053 aa16.56■□□□□ 0.24
PDLIM7-207ENST00000486828 NPIPB9F8W1W9 429 aa16.56■□□□□ 0.24
PDLIM7-207ENST00000486828 HRO43593 1189 aa16.56■□□□□ 0.24
PDLIM7-207ENST00000486828 MRPL3P09001 348 aaKnown RBP16.56■□□□□ 0.24
PDLIM7-207ENST00000486828 CLUP10909 449 aa16.56■□□□□ 0.24
PDLIM7-207ENST00000486828 MAZP56270 477 aaKnown RBP16.56■□□□□ 0.24
PDLIM7-207ENST00000486828 DBPQ10586 325 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-207ENST00000486828 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-207ENST00000486828 RDH10Q8IZV5 341 aa16.56■□□□□ 0.24
PDLIM7-207ENST00000486828 SCAIQ8N9R8 606 aa16.56■□□□□ 0.24
PDLIM7-207ENST00000486828 ADAMTS18Q8TE60 1221 aa16.56■□□□□ 0.24
PDLIM7-207ENST00000486828 ACOT12Q8WYK0 555 aa16.56■□□□□ 0.24
PDLIM7-207ENST00000486828 SENP5Q96HI0 755 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-207ENST00000486828 ORAI3Q9BRQ5 295 aa16.56■□□□□ 0.24
PDLIM7-207ENST00000486828 MMP28Q9H239 520 aa16.56■□□□□ 0.24
PDLIM7-207ENST00000486828 Q9N2J8 555 aa16.56■□□□□ 0.24
PDLIM7-207ENST00000486828 PRTFDC1Q9NRG1 225 aa16.56■□□□□ 0.24
PDLIM7-207ENST00000486828 ZNF221Q9UK13 617 aa16.56■□□□□ 0.24
PDLIM7-207ENST00000486828 ADAM30Q9UKF2 790 aa16.56■□□□□ 0.24
PDLIM7-207ENST00000486828 PLA2G10O15496 165 aa16.55■□□□□ 0.24
PDLIM7-207ENST00000486828 PLPP2O43688 288 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms