RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 SLC35A5Q9BS91 424 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 TACO1Q9BSH4 297 aaKnown RBP6.27□□□□□ -1.41
VPS50-218ENST00000485994 CCDC28BQ9BUN5 200 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 POLDIP3Q9BY77 421 aaKnown RBP6.27□□□□□ -1.41
VPS50-218ENST00000485994 CXXC4Q9H2H0 198 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 FANCFQ9NPI8 374 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.27□□□□□ -1.41
VPS50-218ENST00000485994 ACER3Q9NUN7 267 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 ZNF446Q9NWS9 450 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 GALNT8Q9NY28 637 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 MARCOQ9UEW3 520 aaPredicted RBP6.27□□□□□ -1.41
VPS50-218ENST00000485994 MKLN1Q9UL63 735 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 EMC9Q9Y3B6 208 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 WDR45Q9Y484 360 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 USH1CQ9Y6N9 552 aa6.27□□□□□ -1.41
VPS50-218ENST00000485994 HRNRQ86YZ3 2850 aaPredicted RBP6.27□□□□□ -1.41
VPS50-218ENST00000485994 HEATR1Q9H583 2144 aaKnown RBP6.26□□□□□ -1.41
VPS50-218ENST00000485994 ACANP16112 2415 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 MTORP42345 2549 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 GOLGA8QA0A0J9YX86 632 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 FAM234BA2RU67 622 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 PRAMEF27A3QJZ7 478 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 SH3D21A4FU49 640 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 GOLGA8OA6NCC3 632 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 AGAP5A6NIR3 686 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 HMGB1P1B2RPK0 211 aaPredicted RBP6.26□□□□□ -1.41
VPS50-218ENST00000485994 SHISA8B8ZZ34 492 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 EEF1E1-BLOC1S5C9J1V9 151 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 GOLGA8NF8WBI6 632 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 C16orf97H3BN30 126 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 RFXANKO14593 260 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 CASKO14936 926 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 SEC14L5O43304 696 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 EEF1E1O43324 174 aaKnown RBP6.26□□□□□ -1.41
VPS50-218ENST00000485994 OIP5O43482 229 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 CXCL13O43927 109 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 SASH3O75995 380 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 PRKD3O94806 890 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 SYNGR4O95473 234 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 CSTAP01040 98 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 CD1EP15812 388 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 RPS4Y1P22090 263 aaKnown RBP6.26□□□□□ -1.41
VPS50-218ENST00000485994 DNAJA1P31689 397 aaKnown RBP6.26□□□□□ -1.41
VPS50-218ENST00000485994 SOAT1P35610 550 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 CHI3L1P36222 383 aaPredicted RBP6.26□□□□□ -1.41
VPS50-218ENST00000485994 HTR3AP46098 478 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 EIF1AXP47813 144 aaKnown RBP6.26□□□□□ -1.41
VPS50-218ENST00000485994 SLC6A8P48029 635 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 KHKP50053 298 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 POLR2JP52435 117 aaKnown RBP6.26□□□□□ -1.41
VPS50-218ENST00000485994 SESN3P58005 492 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 FAM27E3Q08E93 113 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 FUT5Q11128 374 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 SELENBP1Q13228 472 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 SKP2Q13309 424 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 PDK3Q15120 406 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 TOMM34Q15785 309 aaPredicted RBP6.26□□□□□ -1.41
VPS50-218ENST00000485994 MAPK14Q16539 360 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 TMEM176BQ3YBM2 270 aaPredicted RBP6.26□□□□□ -1.41
VPS50-218ENST00000485994 TTMPQ5BVD1 217 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 PRAMEF8Q5VWM4 474 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 PRAMEF7Q5VXH5 474 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 TNFAIP8L2Q6P589 184 aaPredicted RBP6.26□□□□□ -1.41
VPS50-218ENST00000485994 PLXDC2Q6UX71 529 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 ZNF621Q6ZSS3 439 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 LUZP2Q86TE4 346 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 CDH24Q86UP0 819 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 CDC20BQ86Y33 519 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 ZZZ3Q8IYH5 903 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 MIER2Q8N344 545 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 ZNF610Q8N9Z0 462 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 GATSQ8NAP1 163 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 LINC01560Q8TB33 94 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 MGARPQ8TDB4 240 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 RNF128Q8TEB7 428 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 SLC25A43Q8WUT9 341 aaPredicted RBP6.26□□□□□ -1.41
VPS50-218ENST00000485994 GTF2H4Q92759 462 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 SLC35B4Q969S0 331 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 ZNF524Q96C55 264 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 OTUB1Q96FW1 271 aaPredicted RBP6.26□□□□□ -1.41
VPS50-218ENST00000485994 REXO5Q96IC2 774 aaKnown RBP6.26□□□□□ -1.41
VPS50-218ENST00000485994 OR52B2Q96RD2 323 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 FOXC2Q99958 501 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 THUMPD3Q9BV44 507 aaKnown RBP6.26□□□□□ -1.41
VPS50-218ENST00000485994 HDHD5Q9BXW7 423 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 PRRG4Q9BZD6 226 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 ADAM19Q9H013 955 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 SLC38A1Q9H2H9 487 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 CLEC4MQ9H2X3 399 aaPredicted RBP6.26□□□□□ -1.41
VPS50-218ENST00000485994 RMND5AQ9H871 391 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 PLEKHF2Q9H8W4 249 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 SLC52A3Q9NQ40 469 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 SERINC1Q9NRX5 453 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 ARGLU1Q9NWB6 273 aaPredicted RBP6.26□□□□□ -1.41
VPS50-218ENST00000485994 CALML5Q9NZT1 146 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 PROCRQ9UNN8 238 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 CELSR1Q9NYQ6 3014 aa6.26□□□□□ -1.41
VPS50-218ENST00000485994 ZNF469Q96JG9 3925 aaPredicted RBP6.26□□□□□ -1.41
VPS50-218ENST00000485994 DSPPQ9NZW4 1301 aa6.25□□□□□ -1.41
VPS50-218ENST00000485994 NPIPA5A0A0B4J1W7 369 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms