RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 CCR9P51686 369 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 MAP2K6P52564 334 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 BLVRAP53004 296 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 EPHB3P54753 998 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 CCL23P55773 120 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 NRG3P56975 720 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 VSX2P58304 361 aaPredicted RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 TAS2R38P59533 333 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 RAP2BP61225 183 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 ACTC1P68032 377 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 ACTA1P68133 377 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 MRPS10P82664 201 aaKnown RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 DGCR2P98153 550 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 CRYZQ08257 329 aaKnown RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 TMEM115Q12893 351 aaPredicted RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 HSPB3Q12988 150 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 RAB33AQ14088 237 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 INSL4Q14641 139 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 OPCMLQ14982 345 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 CEBPEQ15744 281 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 TAF12Q16514 161 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 MAPK14Q16539 360 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 LRRC73Q5JTD7 316 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 UBE2NLQ5JXB2 153 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 METTL11BQ5VVY1 283 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 C9orf131Q5VYM1 1079 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 DMKNQ6E0U4 476 aaPredicted RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 RGS7BPQ6MZT1 257 aaPredicted RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 KIAA1161Q6NSJ0 714 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 RPL13AP3Q6NVV1 102 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 TMEM220Q6QAJ8 160 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 FAM198BQ6UWH4 519 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 KIAA1324Q6UXG2 1013 aaKnown RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 IL20RBQ6UXL0 311 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 Q6ZVL8 140 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 MEPCEQ7L2J0 689 aaKnown RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 CXXC5Q7LFL8 322 aaKnown RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 HSD17B13Q7Z5P4 300 aaPredicted RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 NAXDQ8IW45 347 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 DCUN1D3Q8IWE4 304 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 TCEAL8Q8IYN2 117 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 SLC43A2Q8N370 569 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 FTMTQ8N4E7 242 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 ARL14EPQ8N8R7 260 aaPredicted RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 ZNF740Q8NDX6 193 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 BBS1Q8NFJ9 593 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 OR11G2Q8NGC1 345 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 OR2A12Q8NGT7 310 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 OR2T35Q8NGX2 323 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 OR5W2Q8NH69 310 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 GANCQ8TET4 914 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 SCARB1Q8WTV0 552 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 ASB13Q8WXK3 278 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 ST8SIA4Q92187 359 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 PHYHIPQ92561 330 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 MRPS31Q92665 395 aaKnown RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 EXOSC8Q96B26 276 aaKnown RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 DTD2Q96FN9 168 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 LRIG1Q96JA1 1093 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 ZNF514Q96K75 400 aaPredicted RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 PGLYRP3Q96LB9 341 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 COQ10AQ96MF6 247 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 LINC00052Q96N35 136 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 TOX2Q96NM4 488 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 FCRL4Q96PJ5 515 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 OR2A7Q96R45 310 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 DDOQ99489 341 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 AIF1LQ9BQI0 150 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 NDC1Q9BTX1 674 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 IFT27Q9BW83 186 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 KRTAP4-11Q9BYQ6 195 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 PCBD2Q9H0N5 130 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 ABCG4Q9H172 646 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 SLC38A1Q9H2H9 487 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 GLIPR2Q9H4G4 154 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 DDX31Q9H8H2 851 aaKnown RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 ZNF334Q9HCZ1 680 aaPredicted RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 KRCC1Q9NPI7 259 aaPredicted RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 STARD7Q9NQZ5 370 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 SEMA4GQ9NTN9 838 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 ZCCHC3Q9NUD5 404 aaKnown RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 TDP1Q9NUW8 608 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 FAM86C1Q9NVL1 165 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 GFOD1Q9NXC2 390 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 TEX10Q9NXF1 929 aaPredicted RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 HAO2Q9NYQ3 351 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 CNIH4Q9P003 139 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 AKAP7Q9P0M2 348 aaPredicted RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 PIPOXQ9P0Z9 390 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 CFAP97Q9P2B7 532 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 ZNF223Q9UK11 482 aaPredicted RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 SCML1Q9UN30 329 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 TMEM5Q9Y2B1 443 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 INSL5Q9Y5Q6 135 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 SESN1Q9Y6P5 492 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 OBSL1O75147 1896 aa4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 HELZP42694 1942 aaKnown RBP4.34□□□□□ -1.71
SMARCC1-206ENST00000485737 PIKFYVEQ9Y2I7 2098 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 LOC105369274A0A096LPK9 316 aa4.33□□□□□ -1.72
SMARCC1-206ENST00000485737 A0A1W2PRG6 482 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms