RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 Q8NA96 180 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 FAM83FQ8NEG4 500 aaPredicted RBP15.94■□□□□ 0.14
CHMP3-207ENST00000485465 PYDC1Q8WXC3 89 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 ZBTB8AQ96BR9 441 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 PRRC1Q96M27 445 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 OR2B2Q9GZK3 357 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 ADAM19Q9H013 955 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 YY1AP1Q9H869 796 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 ARMC1Q9NVT9 282 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 RPS6KB2Q9UBS0 482 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 A4GNTQ9UNA3 340 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 AP4S1Q9Y587 144 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 CACNA1GO43497 2377 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 ITPR1Q14643 2758 aa15.94■□□□□ 0.14
CHMP3-207ENST00000485465 USP24Q9UPU5 2620 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 CNTRLQ7Z7A1 2325 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 TRAPPC13A5PLN9 417 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 FFAR1O14842 300 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 DIRAS1O95057 198 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 OR5F1O95221 314 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 NTN1O95631 604 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 ZNF24P17028 368 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 TAS2R41P59536 307 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 SLC25A53Q5H9E4 307 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 ZFP1Q6P2D0 407 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 YRDCQ86U90 279 aaKnown RBP15.93■□□□□ 0.14
CHMP3-207ENST00000485465 OR14L1PQ8NHC6 308 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 POC1BQ8TC44 478 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 ADAMTS16Q8TE57 1224 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 NR4A3Q92570 626 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 MRGPRX4Q96LA9 322 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 ZNF347Q96SE7 839 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 NPAS1Q99742 590 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 PIP5K1AQ99755 562 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 ZDHHC11Q9H8X9 412 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 RIMS3Q9UJD0 308 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 ACAD8Q9UKU7 415 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 RPH3AQ9Y2J0 694 aaPredicted RBP15.93■□□□□ 0.14
CHMP3-207ENST00000485465 ATMQ13315 3056 aa15.93■□□□□ 0.14
CHMP3-207ENST00000485465 A0A0B4J2E0 115 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 A0A1B0GX12 115 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 C7orf72A4D263 438 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 SHISA8B8ZZ34 492 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 TFECO14948 347 aaPredicted RBP15.92■□□□□ 0.14
CHMP3-207ENST00000485465 PRSS23O95084 383 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 WISP1O95388 367 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 CRYABP02511 175 aaKnown RBP15.92■□□□□ 0.14
CHMP3-207ENST00000485465 THY1P04216 161 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 CELA3AP09093 270 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 TCEA1P23193 301 aaKnown RBP15.92■□□□□ 0.14
CHMP3-207ENST00000485465 TACR3P29371 465 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 IFNA8P32881 189 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 EIF1P41567 113 aaKnown RBP15.92■□□□□ 0.14
CHMP3-207ENST00000485465 HTR3AP46098 478 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 CDH12P55289 794 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 FOXK1P85037 733 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 ALDH6A1Q02252 535 aaKnown RBP15.92■□□□□ 0.14
CHMP3-207ENST00000485465 FOXF1Q12946 379 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 SLC10A1Q14973 349 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 TMEM44Q2T9K0 475 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 ULK3Q6PHR2 472 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 GRINAQ7Z429 371 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 GDF7Q7Z4P5 450 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 GTPBP8Q8N3Z3 284 aaPredicted RBP15.92■□□□□ 0.14
CHMP3-207ENST00000485465 DNAJA4Q8WW22 397 aaPredicted RBP15.92■□□□□ 0.14
CHMP3-207ENST00000485465 C3orf49Q96BT1 292 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 SLC41A3Q96GZ6 507 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 FNDC11Q9BVV2 318 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 S100A14Q9HCY8 104 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 ACKR4Q9NPB9 350 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 SELENONQ9NZV5 590 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 RHCGQ9UBD6 479 aa15.92■□□□□ 0.14
CHMP3-207ENST00000485465 H3BNX3 289 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 HNRNPRO43390 633 aaKnown RBP15.91■□□□□ 0.14
CHMP3-207ENST00000485465 TIPRLO75663 272 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 LYPD3O95274 346 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 THRBP10828 461 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 ZNF17P17021 662 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 ADH6P28332 368 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 POLR2HP52434 150 aaKnown RBP15.91■□□□□ 0.14
CHMP3-207ENST00000485465 B3GALT5-AS1P59052 145 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 MERTKQ12866 999 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 ALG10BQ5I7T1 473 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 COLEC12Q5KU26 742 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 WIPI1Q5MNZ9 446 aaPredicted RBP15.91■□□□□ 0.14
CHMP3-207ENST00000485465 AAGABQ6PD74 315 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 ZNF605Q86T29 641 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 ATG4DQ86TL0 474 aaPredicted RBP15.91■□□□□ 0.14
CHMP3-207ENST00000485465 SIAH3Q8IW03 269 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 OFCC1Q8IZS5 231 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 PIK3C3Q8NEB9 887 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 OR5M1Q8NGP8 315 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 STMN2Q93045 179 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 UBL7Q96S82 380 aaPredicted RBP15.91■□□□□ 0.14
CHMP3-207ENST00000485465 PIGQQ9BRB3 760 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 DEFB127Q9H1M4 99 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 NMNAT1Q9HAN9 279 aaPredicted RBP15.91■□□□□ 0.14
CHMP3-207ENST00000485465 C12orf10Q9HB07 376 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 OSGIN1Q9UJX0 560 aa15.91■□□□□ 0.14
CHMP3-207ENST00000485465 SLC7A7Q9UM01 511 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms