RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 TOMM34Q15785 309 aaPredicted RBP11.79□□□□□ -0.52
UBA3-210ENST00000485424 SMU1Q2TAY7 513 aa11.79□□□□□ -0.52
UBA3-210ENST00000485424 KRT71Q3SY84 523 aa11.79□□□□□ -0.52
UBA3-210ENST00000485424 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.79□□□□□ -0.52
UBA3-210ENST00000485424 SFRP5Q5T4F7 317 aa11.79□□□□□ -0.52
UBA3-210ENST00000485424 OR4F3Q6IEY1 312 aa11.79□□□□□ -0.52
UBA3-210ENST00000485424 TFAP2EQ6VUC0 442 aa11.79□□□□□ -0.52
UBA3-210ENST00000485424 NUFIP2Q7Z417 695 aaKnown RBP11.79□□□□□ -0.52
UBA3-210ENST00000485424 KIRREL3Q8IZU9 778 aa11.79□□□□□ -0.52
UBA3-210ENST00000485424 ZNF563Q8TA94 476 aa11.79□□□□□ -0.52
UBA3-210ENST00000485424 AKAP1Q92667 903 aaKnown RBP eCLIP11.79□□□□□ -0.52
UBA3-210ENST00000485424 ZHX1-C8orf76Q96EF9 292 aa11.79□□□□□ -0.52
UBA3-210ENST00000485424 TRMT61AQ96FX7 289 aaKnown RBP11.79□□□□□ -0.52
UBA3-210ENST00000485424 OR5B2Q96R09 309 aa11.79□□□□□ -0.52
UBA3-210ENST00000485424 USB1Q9BQ65 265 aaKnown RBP11.79□□□□□ -0.52
UBA3-210ENST00000485424 KLHDC3Q9BQ90 382 aa11.79□□□□□ -0.52
UBA3-210ENST00000485424 THUMPD3Q9BV44 507 aaKnown RBP11.79□□□□□ -0.52
UBA3-210ENST00000485424 NMUR2Q9GZQ4 415 aa11.79□□□□□ -0.52
UBA3-210ENST00000485424 ADAM21Q9UKJ8 722 aa11.79□□□□□ -0.52
UBA3-210ENST00000485424 RNF115Q9Y4L5 304 aa11.79□□□□□ -0.52
UBA3-210ENST00000485424 SPIN1Q9Y657 262 aaPredicted RBP11.79□□□□□ -0.52
UBA3-210ENST00000485424 MALRD1Q5VYJ5 2156 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 IGHV3-15A0A0B4J1V0 119 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 SERINC4A6NH21 518 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 RNASET2O00584 256 aaKnown RBP11.78□□□□□ -0.52
UBA3-210ENST00000485424 OIP5O43482 229 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 SNUPNO95149 360 aaKnown RBP11.78□□□□□ -0.52
UBA3-210ENST00000485424 CPSF4O95639 269 aaKnown RBP11.78□□□□□ -0.52
UBA3-210ENST00000485424 PLAUP00749 431 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 TFPIP10646 304 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 PAX1P15863 534 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 CHI3L1P36222 383 aaPredicted RBP11.78□□□□□ -0.52
UBA3-210ENST00000485424 ATP5J2P56134 94 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 RAC3P60763 192 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 ABCE1P61221 599 aaKnown RBP11.78□□□□□ -0.52
UBA3-210ENST00000485424 RPS4XP62701 263 aaKnown RBP11.78□□□□□ -0.52
UBA3-210ENST00000485424 CSNK2A1P68400 391 aaPredicted RBP11.78□□□□□ -0.52
UBA3-210ENST00000485424 RASGEF1BQ0VAM2 473 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 MERTKQ12866 999 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 TSC22D1Q15714 1073 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 ARHGAP11BQ3KRB8 267 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 TIGD2Q4W5G0 525 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 RIMKLAQ8IXN7 391 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 ZNF100Q8IYN0 542 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 CLECL1Q8IZS7 167 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 ZNF619Q8N2I2 560 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 ZNF611Q8N823 705 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 ST8SIA1Q92185 356 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 HSD17B8Q92506 261 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 FBXW5Q969U6 566 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 GTPBP3Q969Y2 492 aaKnown RBP11.78□□□□□ -0.52
UBA3-210ENST00000485424 PKNOX2Q96KN3 472 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 LAT2Q9GZY6 243 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 OR51I1Q9H343 314 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 CENPHQ9H3R5 247 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 COQ10BQ9H8M1 238 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 MKLN1Q9UL63 735 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 LAMP3Q9UQV4 416 aa11.78□□□□□ -0.52
UBA3-210ENST00000485424 SULT2B1O00204 365 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 NTN1O95631 604 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 SERPINE1P05121 402 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 UBTFL6P0CB48 400 aaPredicted RBP11.77□□□□□ -0.53
UBA3-210ENST00000485424 CREB1P16220 341 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 UQCRC2P22695 453 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 ARRB2P32121 409 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 CASP9P55211 416 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 C21orf58P58505 322 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 ITGADQ13349 1161 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 P2RY6Q15077 328 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 STK11Q15831 433 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 ZNF141Q15928 474 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 GPAT3Q53EU6 434 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 ANXA8L1Q5VT79 327 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 EIF3MQ7L2H7 374 aaKnown RBP11.77□□□□□ -0.53
UBA3-210ENST00000485424 CXXC5Q7LFL8 322 aaKnown RBP11.77□□□□□ -0.53
UBA3-210ENST00000485424 BHLHA15Q7RTS1 189 aaPredicted RBP11.77□□□□□ -0.53
UBA3-210ENST00000485424 GABRG1Q8N1C3 465 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 CLEC4FQ8N1N0 589 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 ZNF781Q8N8C0 355 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 SLC25A43Q8WUT9 341 aaPredicted RBP11.77□□□□□ -0.53
UBA3-210ENST00000485424 XAGE5Q8WWM1 108 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 MUCL1Q96DR8 90 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 POTEKPQ9BYX7 375 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 ZNF701Q9NV72 531 aaPredicted RBP11.77□□□□□ -0.53
UBA3-210ENST00000485424 ASIC5Q9NY37 505 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 EMC3Q9P0I2 261 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 SLC35A3Q9Y2D2 325 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 RAP2CQ9Y3L5 183 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 WDR45Q9Y484 360 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 ARFGEF3Q5TH69 2177 aa11.77□□□□□ -0.53
UBA3-210ENST00000485424 A0A1W2PP18 115 aa11.76□□□□□ -0.53
UBA3-210ENST00000485424 NPIPB9F8W1W9 429 aa11.76□□□□□ -0.53
UBA3-210ENST00000485424 TM9SF1O15321 606 aa11.76□□□□□ -0.53
UBA3-210ENST00000485424 BIRC5O15392 142 aa11.76□□□□□ -0.53
UBA3-210ENST00000485424 ITM2AO43736 263 aa11.76□□□□□ -0.53
UBA3-210ENST00000485424 TYROBPO43914 113 aa11.76□□□□□ -0.53
UBA3-210ENST00000485424 EFNA2O43921 213 aa11.76□□□□□ -0.53
UBA3-210ENST00000485424 GCM2O75603 506 aaPredicted RBP11.76□□□□□ -0.53
UBA3-210ENST00000485424 OR12D1P0DN82 309 aa11.76□□□□□ -0.53
UBA3-210ENST00000485424 NID1P14543 1247 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms