RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 THUMPD3Q9BV44 507 aaKnown RBP17.05■□□□□ 0.32
COL27A1-205ENST00000485397 POTEKPQ9BYX7 375 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 KLHL9Q9P2J3 617 aa17.05■□□□□ 0.32
COL27A1-205ENST00000485397 MAGED1Q9Y5V3 778 aaPredicted RBP17.05■□□□□ 0.32
COL27A1-205ENST00000485397 SMAD9O15198 467 aaKnown RBP17.04■□□□□ 0.32
COL27A1-205ENST00000485397 FCMRO60667 390 aa17.04■□□□□ 0.32
COL27A1-205ENST00000485397 SERPINB5P36952 375 aa17.04■□□□□ 0.32
COL27A1-205ENST00000485397 STK11Q15831 433 aa17.04■□□□□ 0.32
COL27A1-205ENST00000485397 PGS1Q32NB8 556 aa17.04■□□□□ 0.32
COL27A1-205ENST00000485397 ZNF672Q499Z4 452 aaPredicted RBP17.04■□□□□ 0.32
COL27A1-205ENST00000485397 Q6ZT83 130 aa17.04■□□□□ 0.32
COL27A1-205ENST00000485397 RIBC1Q8N443 379 aaPredicted RBP17.04■□□□□ 0.32
COL27A1-205ENST00000485397 GTPBP3Q969Y2 492 aaKnown RBP17.04■□□□□ 0.32
COL27A1-205ENST00000485397 TRMT61AQ96FX7 289 aaKnown RBP17.04■□□□□ 0.32
COL27A1-205ENST00000485397 NMUR2Q9GZQ4 415 aa17.04■□□□□ 0.32
COL27A1-205ENST00000485397 LAT2Q9GZY6 243 aa17.04■□□□□ 0.32
COL27A1-205ENST00000485397 LIPT1Q9Y234 373 aa17.04■□□□□ 0.32
COL27A1-205ENST00000485397 ZANQ9Y493 2812 aa17.04■□□□□ 0.32
COL27A1-205ENST00000485397 CADP27708 2225 aa17.04■□□□□ 0.32
COL27A1-205ENST00000485397 A0A1W2PP18 115 aa17.03■□□□□ 0.32
COL27A1-205ENST00000485397 CYTIPO60759 359 aa17.03■□□□□ 0.32
COL27A1-205ENST00000485397 IDUAP35475 653 aa17.03■□□□□ 0.32
COL27A1-205ENST00000485397 CASP9P55211 416 aa17.03■□□□□ 0.32
COL27A1-205ENST00000485397 SESN3P58005 492 aa17.03■□□□□ 0.32
COL27A1-205ENST00000485397 FAPQ12884 760 aa17.03■□□□□ 0.32
COL27A1-205ENST00000485397 SKP2Q13309 424 aa17.03■□□□□ 0.32
COL27A1-205ENST00000485397 ZNF141Q15928 474 aa17.03■□□□□ 0.32
COL27A1-205ENST00000485397 PGGHGQ32M88 737 aa17.03■□□□□ 0.32
COL27A1-205ENST00000485397 OR4F3Q6IEY1 312 aa17.03■□□□□ 0.32
COL27A1-205ENST00000485397 C3orf33Q6P1S2 294 aa17.03■□□□□ 0.32
COL27A1-205ENST00000485397 BHLHB9Q6PI77 547 aa17.03■□□□□ 0.32
COL27A1-205ENST00000485397 ZNF75CPQ92670 426 aaPredicted RBP17.03■□□□□ 0.32
COL27A1-205ENST00000485397 LGALS13Q9UHV8 139 aa17.03■□□□□ 0.32
COL27A1-205ENST00000485397 MKLN1Q9UL63 735 aa17.03■□□□□ 0.32
COL27A1-205ENST00000485397 DNAJA2O60884 412 aa17.02■□□□□ 0.32
COL27A1-205ENST00000485397 RAMP1O60894 148 aa17.02■□□□□ 0.32
COL27A1-205ENST00000485397 NDUFS7O75251 213 aa17.02■□□□□ 0.32
COL27A1-205ENST00000485397 UGT2B17O75795 530 aa17.02■□□□□ 0.32
COL27A1-205ENST00000485397 BPGMP07738 259 aa17.02■□□□□ 0.32
COL27A1-205ENST00000485397 NUDT17P0C025 328 aa17.02■□□□□ 0.32
COL27A1-205ENST00000485397 UBTFL6P0CB48 400 aaPredicted RBP17.02■□□□□ 0.32
COL27A1-205ENST00000485397 IGHV1-2P23083 117 aa17.02■□□□□ 0.32
COL27A1-205ENST00000485397 ACVR1BP36896 505 aa17.02■□□□□ 0.32
COL27A1-205ENST00000485397 CLDN8P56748 225 aa17.02■□□□□ 0.32
COL27A1-205ENST00000485397 EMX2Q04743 252 aa17.02■□□□□ 0.32
COL27A1-205ENST00000485397 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.02■□□□□ 0.32
COL27A1-205ENST00000485397 ARL8AQ96BM9 186 aa17.02■□□□□ 0.32
COL27A1-205ENST00000485397 SLC35G5Q96KT7 338 aa17.02■□□□□ 0.32
COL27A1-205ENST00000485397 USB1Q9BQ65 265 aaKnown RBP17.02■□□□□ 0.32
COL27A1-205ENST00000485397 REG4Q9BYZ8 158 aa17.02■□□□□ 0.32
COL27A1-205ENST00000485397 TRIM2Q9C040 744 aa17.02■□□□□ 0.32
COL27A1-205ENST00000485397 SLCO5A1Q9H2Y9 848 aa17.02■□□□□ 0.32
COL27A1-205ENST00000485397 L2HGDHQ9H9P8 463 aa17.02■□□□□ 0.32
COL27A1-205ENST00000485397 RNF103-CHMP3A0A140T963 221 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 DUXAA6NLW8 204 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 ZNF724A8MTY0 619 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 BCAS1O75363 584 aaPredicted RBP17.01■□□□□ 0.31
COL27A1-205ENST00000485397 CRLF1O75462 422 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 STX11O75558 287 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 AK1P00568 194 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 CSTAP01040 98 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 FESP07332 822 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 DIO1P49895 249 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 C21orf58P58505 322 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 IFFO1Q0D2I5 559 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 MERTKQ12866 999 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 PPA1Q15181 289 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 MAPK14Q16539 360 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 ARHGAP11BQ3KRB8 267 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 DNAJC14Q6Y2X3 702 aaPredicted RBP17.01■□□□□ 0.31
COL27A1-205ENST00000485397 TMPPEQ6ZT21 453 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 ST8SIA1Q92185 356 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 PPP1R36Q96LQ0 422 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 ZNF350Q9GZX5 532 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 OR51I1Q9H343 314 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 ACER3Q9NUN7 267 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 CISD1Q9NZ45 108 aaKnown RBP17.01■□□□□ 0.31
COL27A1-205ENST00000485397 NPAP1Q9NZP6 1156 aa17.01■□□□□ 0.31
COL27A1-205ENST00000485397 SHISA9B4DS77 424 aa17■□□□□ 0.31
COL27A1-205ENST00000485397 ITM2AO43736 263 aa17■□□□□ 0.31
COL27A1-205ENST00000485397 CD8AP01732 235 aa17■□□□□ 0.31
COL27A1-205ENST00000485397 IGHV4-39P01824 125 aa17■□□□□ 0.31
COL27A1-205ENST00000485397 OR12D1P0DN82 309 aa17■□□□□ 0.31
COL27A1-205ENST00000485397 PTNP21246 168 aa17■□□□□ 0.31
COL27A1-205ENST00000485397 MAD2L1Q13257 205 aaPredicted RBP17■□□□□ 0.31
COL27A1-205ENST00000485397 ETFDHQ16134 617 aa17■□□□□ 0.31
COL27A1-205ENST00000485397 C16orf62Q7Z3J2 963 aa17■□□□□ 0.31
COL27A1-205ENST00000485397 GALNT5Q7Z7M9 940 aa17■□□□□ 0.31
COL27A1-205ENST00000485397 LSRQ86X29 649 aaPredicted RBP17■□□□□ 0.31
COL27A1-205ENST00000485397 ZNF100Q8IYN0 542 aa17■□□□□ 0.31
COL27A1-205ENST00000485397 OR4A15Q8NGL6 344 aa17■□□□□ 0.31
COL27A1-205ENST00000485397 DNAJA3Q96EY1 480 aa17■□□□□ 0.31
COL27A1-205ENST00000485397 TRAF4Q9BUZ4 470 aaPredicted RBP17■□□□□ 0.31
COL27A1-205ENST00000485397 SERINC1Q9NRX5 453 aa17■□□□□ 0.31
COL27A1-205ENST00000485397 NOP53Q9NZM5 478 aaKnown RBP17■□□□□ 0.31
COL27A1-205ENST00000485397 GDF2Q9UK05 429 aaPredicted RBP17■□□□□ 0.31
COL27A1-205ENST00000485397 SULT2B1O00204 365 aa16.99■□□□□ 0.31
COL27A1-205ENST00000485397 IGHV3-9P01782 118 aa16.99■□□□□ 0.31
COL27A1-205ENST00000485397 THBS1P07996 1170 aa16.99■□□□□ 0.31
COL27A1-205ENST00000485397 TFPIP10646 304 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms