RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 P3H2Q8IVL5 708 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 PACRGLQ8N7B6 248 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 FADS6Q8N9I5 356 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 AQP11Q8NBQ7 271 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 CATSPER1Q8NEC5 780 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 OR2M3Q8NG83 312 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 PFN4Q8NHR9 129 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 DCBLD2Q96PD2 775 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 ZNF184Q99676 751 aaPredicted RBP13.22□□□□□ -0.29
LRIF1-202ENST00000485275 ANKRD19PQ9H560 264 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 TMEM27Q9HBJ8 222 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 C20orf141Q9NUB4 165 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 MPDZO75970 2070 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 ZZEF1O43149 2961 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 IGKV1D-42A0A075B6H8 117 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 ARRDC5A6NEK1 342 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 SHISA8B8ZZ34 492 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 GNB5O14775 395 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 CEACAM4O75871 244 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 THRBP10828 461 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 POU2F1P14859 743 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 SLC6A8P48029 635 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 CLK3P49761 638 aaKnown RBP13.22□□□□□ -0.29
LRIF1-202ENST00000485275 FOXK1P85037 733 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 CBFBQ13951 182 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 QPRTQ15274 297 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 OR1C1Q15619 314 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 AGAP7PQ5VUJ5 663 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 WBP2NLQ6ICG8 309 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 SLC30A6Q6NXT4 461 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 ISLR2Q6UXK2 745 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 ZER1Q7Z7L7 766 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 GALNT5Q7Z7M9 940 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 ATG4DQ86TL0 474 aaPredicted RBP13.22□□□□□ -0.29
LRIF1-202ENST00000485275 TOR1AIP2Q8NFQ8 470 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 ACOT11Q8WXI4 607 aaPredicted RBP13.22□□□□□ -0.29
LRIF1-202ENST00000485275 NR4A3Q92570 626 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 SLC38A4Q969I6 547 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 AGAP4Q96P64 663 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 MBOAT4Q96T53 435 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 RBM4BQ9BQ04 359 aaKnown RBP13.22□□□□□ -0.29
LRIF1-202ENST00000485275 RBM4Q9BWF3 364 aaKnown RBP13.22□□□□□ -0.29
LRIF1-202ENST00000485275 DSN1Q9H410 356 aa13.22□□□□□ -0.29
LRIF1-202ENST00000485275 MEPEQ9NQ76 525 aaPredicted RBP13.22□□□□□ -0.29
LRIF1-202ENST00000485275 TNRC6AQ8NDV7 1962 aaKnown RBP13.22□□□□□ -0.29
LRIF1-202ENST00000485275 ANKRD33BA6NCL7 494 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 ANKUB1A6NFN9 424 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 LRRC3CA6NJW4 275 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 C1QTNF9BB2RNN3 333 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 SNPHO15079 494 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 OR10H3O60404 316 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 TRIM3O75382 744 aaPredicted RBP13.21□□□□□ -0.29
LRIF1-202ENST00000485275 NUDT14O95848 222 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 HPRP00739 348 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 C1QTNF9P0C862 333 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 ENDOUP21128 410 aaKnown RBP13.21□□□□□ -0.29
LRIF1-202ENST00000485275 EPHA2P29317 976 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 TACR3P29371 465 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 POLR2IP36954 125 aaKnown RBP13.21□□□□□ -0.29
LRIF1-202ENST00000485275 OMPP47874 163 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 MFAP5Q13361 173 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 GK3PQ14409 553 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 NHSL2Q5HYW2 709 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 ULK3Q6PHR2 472 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 PRICKLE2Q7Z3G6 844 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 NRMQ8IXM6 262 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 GPALPP1Q8IXQ4 340 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 ATG16L2Q8NAA4 619 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 MDS2Q8NDY4 140 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 ZNF563Q8TA94 476 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 RNF217Q8TC41 542 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 GTPBP3Q969Y2 492 aaKnown RBP13.21□□□□□ -0.29
LRIF1-202ENST00000485275 SDCCAG3Q96C92 435 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 UTP23Q9BRU9 249 aaKnown RBP13.21□□□□□ -0.29
LRIF1-202ENST00000485275 ADAM19Q9H013 955 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 VCX3BQ9H321 246 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 RYDENQ9NUL5 291 aaKnown RBP13.21□□□□□ -0.29
LRIF1-202ENST00000485275 CNIH4Q9P003 139 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 VDAC3Q9Y277 283 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 RAXQ9Y2V3 346 aa13.21□□□□□ -0.29
LRIF1-202ENST00000485275 A0A087WUJ7 227 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 KPNA4O00629 521 aaPredicted RBP13.2□□□□□ -0.3
LRIF1-202ENST00000485275 SLC25A12O75746 678 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 PRKCAP17252 672 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 PGCP20142 388 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 IGFBP5P24593 272 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 HOXD11P31277 338 aaPredicted RBP13.2□□□□□ -0.3
LRIF1-202ENST00000485275 SLC1A3P43003 542 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 CD97P48960 835 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 ARHGDIAP52565 204 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 SUMO3P55854 103 aaPredicted RBP13.2□□□□□ -0.3
LRIF1-202ENST00000485275 SMIM11AP58511 58 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 COPZ1P61923 177 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 EGR4Q05215 589 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 ZIK1Q3SY52 487 aaPredicted RBP13.2□□□□□ -0.3
LRIF1-202ENST00000485275 C6orf52Q5T4I8 152 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 ZNF730Q6ZMV8 503 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 CCDC81Q6ZN84 652 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 MBOAT2Q6ZWT7 520 aa13.2□□□□□ -0.3
LRIF1-202ENST00000485275 TMEM239Q8WW34 195 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms