RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 F10P00742 488 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 ADRB3P13945 408 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 UQCRBP14927 111 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 IGFBP3P17936 291 aaPredicted RBP1.63□□□□□ -2.15
VPS50-216ENST00000484954 NMT1P30419 496 aaKnown RBP1.63□□□□□ -2.15
VPS50-216ENST00000484954 HOXA9P31269 272 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 SFNP31947 248 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 MAGEA5P43359 124 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 BIDP55957 195 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 NTHL1P78549 312 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 TGFBR3Q03167 851 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 GABPB1Q06547 395 aaPredicted RBP1.63□□□□□ -2.15
VPS50-216ENST00000484954 CCDC173Q0VFZ6 552 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 FAM83EQ2M2I3 478 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 CCDC57Q2TAC2 916 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 C2orf76Q3KRA6 126 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 ADPRMQ3LIE5 342 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 C1QTNF12Q5T7M4 302 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 ETFRF1Q6IPR1 90 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 FAM71E1Q6IPT2 247 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 ZSCAN25Q6NSZ9 544 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 RNF182Q8N6D2 247 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 OR10G2Q8NGC3 310 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 STARD8Q92502 1023 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 TIMD4Q96H15 378 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 FOPNLQ96NB1 174 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 KCNA7Q96RP8 456 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 TESK2Q96S53 571 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 TSG101Q99816 390 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 NRIP2Q9BQI9 281 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 XPO4Q9C0E2 1151 aaKnown RBP1.63□□□□□ -2.15
VPS50-216ENST00000484954 ING2Q9H160 280 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 TPK1Q9H3S4 243 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 TREM2Q9NZC2 230 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 WIF1Q9Y5W5 379 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 AP4B1Q9Y6B7 739 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 ABCC4O15439 1325 aa1.63□□□□□ -2.15
VPS50-216ENST00000484954 SYCE3A1L190 88 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 ARHGAP42A6NI28 874 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 SLC9B1P1A6NJY1 282 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 VSTM2BA6NLU5 285 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 STX7O15400 261 aaKnown RBP1.62□□□□□ -2.15
VPS50-216ENST00000484954 AIREO43918 545 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 KERAO60938 352 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 GIPP09681 153 aaPredicted RBP1.62□□□□□ -2.15
VPS50-216ENST00000484954 CHTF8P0CG12 524 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 CRISP2P16562 243 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 OAS2P29728 719 aaKnown RBP1.62□□□□□ -2.15
VPS50-216ENST00000484954 DEFB116Q30KQ4 102 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 ACSM5Q6NUN0 579 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 RNF148Q8N7C7 305 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 ZNF615Q8N8J6 731 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 ZNF709Q8N972 641 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 SPC24Q8NBT2 197 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 GIMAP1Q8WWP7 306 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 VSTM2LQ96N03 204 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 GAL3ST1Q99999 423 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 YAE1D1Q9NRH1 226 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 ANO10Q9NW15 660 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 MRPL39Q9NYK5 338 aaKnown RBP1.62□□□□□ -2.15
VPS50-216ENST00000484954 OPN4Q9UHM6 478 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 DOCK9Q9BZ29 2069 aa1.62□□□□□ -2.15
VPS50-216ENST00000484954 ANKRD30BLA7E2S9 258 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 HCRTR1O43613 425 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 BCAS2O75934 225 aaPredicted RBP1.61□□□□□ -2.15
VPS50-216ENST00000484954 LALBAP00709 142 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 RBMY1CP0DJD4 496 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 RNH1P13489 461 aaKnown RBP1.61□□□□□ -2.15
VPS50-216ENST00000484954 CD80P33681 288 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 KLK7P49862 253 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 EFNB2P52799 333 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 SLC26A5P58743 744 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 OSTNP61366 133 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 ZNF763Q0D2J5 394 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 ATXN7L3Q14CW9 347 aaPredicted RBP1.61□□□□□ -2.15
VPS50-216ENST00000484954 NRF1Q16656 503 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 SLC5A12Q1EHB4 618 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 PIGGQ5H8A4 983 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 CTRB2Q6GPI1 263 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 C6orf89Q6UWU4 347 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 ZNF621Q6ZSS3 439 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 ACOT7LQ6ZUV0 252 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 ANKRD37Q7Z713 158 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 C12orf56Q8IXR9 622 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 C6orf223Q8N319 242 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 CYB561D1Q8N8Q1 229 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 OR8H1Q8NGG4 311 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 OR56B1Q8NGI3 324 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 OR56B4Q8NH76 319 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 NANPQ8TBE9 248 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 AENQ8WTP8 325 aaKnown RBP1.61□□□□□ -2.15
VPS50-216ENST00000484954 FCGR1BQ92637 280 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 ATP6V0BQ99437 205 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 TBCDQ9BTW9 1192 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 SPATA16Q9BXB7 569 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 CRNKL1Q9BZJ0 848 aaKnown RBP1.61□□□□□ -2.15
VPS50-216ENST00000484954 ROPN1Q9HAT0 212 aaPredicted RBP1.61□□□□□ -2.15
VPS50-216ENST00000484954 EML4Q9HC35 981 aaKnown RBP1.61□□□□□ -2.15
VPS50-216ENST00000484954 INPP5EQ9NRR6 644 aa1.61□□□□□ -2.15
VPS50-216ENST00000484954 WARS2Q9UGM6 360 aaKnown RBP1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms