RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 SLC16A1P53985 500 aa18.21■□□□□ 0.51
LIMS2-215ENST00000484252 NRG3P56975 720 aa18.21■□□□□ 0.51
LIMS2-215ENST00000484252 GAS6Q14393 721 aa18.21■□□□□ 0.51
LIMS2-215ENST00000484252 GPR176Q14439 515 aa18.21■□□□□ 0.51
LIMS2-215ENST00000484252 Q5BKY6 102 aa18.21■□□□□ 0.51
LIMS2-215ENST00000484252 TMEM196Q5HYL7 178 aa18.21■□□□□ 0.51
LIMS2-215ENST00000484252 PYHIN1Q6K0P9 492 aa18.21■□□□□ 0.51
LIMS2-215ENST00000484252 RD3Q7Z3Z2 195 aa18.21■□□□□ 0.51
LIMS2-215ENST00000484252 SIX5Q8N196 739 aa18.21■□□□□ 0.51
LIMS2-215ENST00000484252 MS4A15Q8N5U1 240 aa18.21■□□□□ 0.51
LIMS2-215ENST00000484252 SAMD12Q8N8I0 201 aa18.21■□□□□ 0.51
LIMS2-215ENST00000484252 C4orf36Q96KX1 117 aa18.21■□□□□ 0.51
LIMS2-215ENST00000484252 PPIL3Q9H2H8 161 aaKnown RBP18.21■□□□□ 0.51
LIMS2-215ENST00000484252 TMEM74BQ9NUR3 256 aa18.21■□□□□ 0.51
LIMS2-215ENST00000484252 FBXO34Q9NWN3 711 aa18.21■□□□□ 0.51
LIMS2-215ENST00000484252 MAT2BQ9NZL9 334 aa18.21■□□□□ 0.51
LIMS2-215ENST00000484252 ZMIZ1Q9ULJ6 1067 aa18.21■□□□□ 0.51
LIMS2-215ENST00000484252 RASD1Q9Y272 281 aa18.21■□□□□ 0.51
LIMS2-215ENST00000484252 LOC105369274A0A096LPK9 316 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 NPIPA5A0A0B4J1W7 369 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 ZSCAN5BA6NJL1 495 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 E9PI62 339 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 NPIPA7E9PJI5 369 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 LDB3O75112 727 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 IFNGP01579 166 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 EIF4EP06730 217 aaKnown RBP18.2■□□□□ 0.5
LIMS2-215ENST00000484252 NPIPA8P0DM63 369 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 POLR2CP19387 275 aaPredicted RBP18.2■□□□□ 0.5
LIMS2-215ENST00000484252 GABRA3P34903 492 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 ZNF85Q03923 595 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 SLC3A1Q07837 685 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 ARHGAP11AQ6P4F7 1023 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 FIGNL1Q6PIW4 674 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 OR4N4Q8N0Y3 316 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 SLC44A3Q8N4M1 653 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 SMPDL3BQ92485 455 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 LRFN5Q96NI6 719 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 ERVMER34-1Q9H9K5 563 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 SLC28A3Q9HAS3 691 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 MEPEQ9NQ76 525 aaPredicted RBP18.2■□□□□ 0.5
LIMS2-215ENST00000484252 WBP1LQ9NX94 342 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 NPFFR2Q9Y5X5 522 aa18.2■□□□□ 0.5
LIMS2-215ENST00000484252 TRBV23OR9-2A0A075B6M9 112 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 A0A0B4J2E0 115 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 A0A1B0GX12 115 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 OR6C74A6NCV1 312 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 ZNF860A6NHJ4 632 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 B8ZZF3 427 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 H0YGG7 62 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 J3QLW9 94 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 CYR61O00622 381 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 TNFRSF10CO14798 259 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 GUSBP08236 651 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 PEPDP12955 493 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 ZNF19P17023 458 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 SLC6A6P31641 620 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 ARF3P61204 181 aaPredicted RBP18.19■□□□□ 0.5
LIMS2-215ENST00000484252 MGAT2Q10469 447 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 MRPL28Q13084 256 aaKnown RBP18.19■□□□□ 0.5
LIMS2-215ENST00000484252 DMKNQ6E0U4 476 aaPredicted RBP18.19■□□□□ 0.5
LIMS2-215ENST00000484252 RTL4Q6ZR62 310 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 OR10G6Q8NH81 332 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 CCL4L1Q8NHW4 92 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 MCUBQ9NWR8 336 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 NCKAP1Q9Y2A7 1128 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 A0A0G2JK05 382 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 SERPINA3P01011 423 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 IL9P15248 144 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 AHCYP23526 432 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 E2F1Q01094 437 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 CRMP1Q14194 572 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 TCEA2Q15560 299 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 PLA1AQ53H76 456 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 GRAMD2AQ8IUY3 354 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 FAM109AQ8N4B1 249 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 HOXB13Q92826 284 aaPredicted RBP18.19■□□□□ 0.5
LIMS2-215ENST00000484252 TSACCQ96A04 125 aaPredicted RBP18.19■□□□□ 0.5
LIMS2-215ENST00000484252 PGLYRP3Q96LB9 341 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 MYADMQ96S97 322 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 WDR70Q9NW82 654 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 ENTPD2Q9Y5L3 495 aa18.19■□□□□ 0.5
LIMS2-215ENST00000484252 C5orf42Q9H799 3197 aa18.18■□□□□ 0.5
LIMS2-215ENST00000484252 TRAV27A0A087WT01 109 aa18.18■□□□□ 0.5
LIMS2-215ENST00000484252 ERVH48-1M5A8F1 160 aa18.18■□□□□ 0.5
LIMS2-215ENST00000484252 NKX2-2O95096 273 aa18.18■□□□□ 0.5
LIMS2-215ENST00000484252 RASGRP1O95267 797 aa18.18■□□□□ 0.5
LIMS2-215ENST00000484252 PPP1R3DO95685 299 aa18.18■□□□□ 0.5
LIMS2-215ENST00000484252 MRPL3P09001 348 aaKnown RBP18.18■□□□□ 0.5
LIMS2-215ENST00000484252 OR3A3P47888 321 aa18.18■□□□□ 0.5
LIMS2-215ENST00000484252 CCDC85BQ15834 202 aaPredicted RBP18.18■□□□□ 0.5
LIMS2-215ENST00000484252 IDO2Q6ZQW0 420 aa18.18■□□□□ 0.5
LIMS2-215ENST00000484252 ZNF784Q8NCA9 323 aaPredicted RBP18.18■□□□□ 0.5
LIMS2-215ENST00000484252 OR51A7Q8NH64 312 aa18.18■□□□□ 0.5
LIMS2-215ENST00000484252 TRMT10AQ8TBZ6 339 aaKnown RBP18.18■□□□□ 0.5
LIMS2-215ENST00000484252 DOK4Q8TEW6 326 aa18.18■□□□□ 0.5
LIMS2-215ENST00000484252 CTHRC1Q96CG8 243 aa18.18■□□□□ 0.5
LIMS2-215ENST00000484252 ZNF426Q9BUY5 554 aa18.18■□□□□ 0.5
LIMS2-215ENST00000484252 TRIM2Q9C040 744 aa18.18■□□□□ 0.5
LIMS2-215ENST00000484252 TMEM168Q9H0V1 697 aa18.18■□□□□ 0.5
LIMS2-215ENST00000484252 KCNN3Q9UGI6 736 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms