RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 XKR6Q5GH73 641 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 DCST1Q5T197 706 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 TBC1D3GQ6DHY5 549 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 TBC1D3CQ6IPX1 549 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 CD200R1LQ6Q8B3 271 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 FAM151BQ6UXP7 276 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 ZNF66Q6ZN08 573 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 RTL10Q7L3V2 364 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 CTU1Q7Z7A3 348 aaKnown RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 CCDC71Q8IV32 467 aaPredicted RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 LAS2Q8IYD9 372 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 TBC1D3Q8IZP1 549 aaPredicted RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 TRAM1L1Q8N609 369 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 NANOGP1Q8N7R0 232 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 OR2AP1Q8NGE2 309 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 TMEM163Q8TC26 289 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 GPR151Q8TDV0 419 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 UTP15Q8TED0 518 aaKnown RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 C15orf40Q8WUR7 153 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 ASB13Q8WXK3 278 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 OR5P2Q8WZ92 322 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 SGCDQ92629 289 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 UFD1Q92890 307 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 OTULINQ96BN8 352 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 ECHDC3Q96DC8 303 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 OTUB1Q96FW1 271 aaPredicted RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 PDXPQ96GD0 296 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 ST6GAL2Q96JF0 529 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 CMTM3Q96MX0 182 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 SLC38A2Q96QD8 506 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 TMEM246Q9BRR3 403 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 CCM2Q9BSQ5 444 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 BBS2Q9BXC9 721 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 INPP5EQ9NRR6 644 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 ACSS1Q9NUB1 689 aaPredicted RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 ACER3Q9NUN7 267 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 ACOXLQ9NUZ1 547 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 VNN3Q9NY84 501 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 GPR83Q9NYM4 423 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 CALML5Q9NZT1 146 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 MRPL15Q9P015 296 aaKnown RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 AKAP7Q9P0M2 348 aaPredicted RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 C5AR2Q9P296 337 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 NUP50Q9UKX7 468 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 ING4Q9UNL4 249 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 SLC9A8Q9Y2E8 581 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 LSM2Q9Y333 95 aaKnown RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 OR51B4Q9Y5P0 310 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 MAU2Q9Y6X3 613 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 NYNRINQ9P2P1 1898 aaKnown RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 A0A1B0GW55 424 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 GNG14A0A1W2PPG7 69 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 GSAPA4D1B5 854 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 GABRR3A8MPY1 467 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 WASH3PC4AMC7 463 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 H3BQ06 376 aaPredicted RBP4.42□□□□□ -1.7
SSBP1-211ENST00000484178 GAPDHSO14556 408 aaPredicted RBP4.42□□□□□ -1.7
SSBP1-211ENST00000484178 BET1O15155 118 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 POLR1CO15160 346 aaPredicted RBP4.42□□□□□ -1.7
SSBP1-211ENST00000484178 RGS5O15539 181 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 COCHO43405 550 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 PI15O43692 258 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 PCDH7O60245 1069 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 TPST2O60704 377 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 NOS1APO75052 506 aaPredicted RBP4.42□□□□□ -1.7
SSBP1-211ENST00000484178 ATG13O75143 517 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 DDNO94850 711 aaPredicted RBP4.42□□□□□ -1.7
SSBP1-211ENST00000484178 SOX30O94993 753 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 CPSF4O95639 269 aaKnown RBP4.42□□□□□ -1.7
SSBP1-211ENST00000484178 DHFRP00374 187 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 HMGN1P05114 100 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 H1F0P07305 194 aaKnown RBP4.42□□□□□ -1.7
SSBP1-211ENST00000484178 DUX4L2P0CJ85 424 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 DUX4L3P0CJ86 424 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 DUX4L4P0CJ87 422 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 DUX4L5P0CJ88 424 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 DUX4L6P0CJ89 424 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 DUX4L7P0CJ90 424 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 HSMCR30P0CW71 290 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 TMEM225BP0DP42 221 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 ACP2P11117 423 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 CHRNB1P11230 501 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 LAMP1P11279 417 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 CYBAP13498 195 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 EPORP19235 508 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 TCEA1P23193 301 aaKnown RBP4.42□□□□□ -1.7
SSBP1-211ENST00000484178 F8A1P23610 371 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 ALDH4A1P30038 563 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 CCR7P32248 378 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 HNF1BP35680 557 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 TALDO1P37837 337 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 CDKN2CP42773 168 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 NR4A2P43354 598 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 RGRP47804 291 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 PGFP49763 221 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 XKP51811 444 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 ACLYP53396 1101 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 MVDP53602 400 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 ATP12AP54707 1039 aa4.42□□□□□ -1.7
SSBP1-211ENST00000484178 CDH12P55289 794 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms