RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 PRRX2Q99811 253 aa24.05■■□□□ 1.44
SHOX2-204ENST00000483851 NPFFR2Q9Y5X5 522 aa24.05■■□□□ 1.44
SHOX2-204ENST00000483851 PIP5K1CO60331 668 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 MAN1A2O60476 641 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 KLF7O75840 302 aaPredicted RBP24.04■■□□□ 1.44
SHOX2-204ENST00000483851 ZFAND5O76080 213 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 GPR4P46093 362 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 OCLNQ16625 522 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 FAM199XQ6PEV8 388 aaPredicted RBP24.04■■□□□ 1.44
SHOX2-204ENST00000483851 KIRREL2Q6UWL6 708 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 FAM26EQ8N5C1 309 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 GALNT6Q8NCL4 622 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 RNF217Q8TC41 542 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 PCDHGA3Q9Y5H0 932 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 TRBV11-1A0A0K0K1C0 115 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 C4orf47A7E2U8 309 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 PPM1BO75688 479 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 CLPXO76031 633 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 NTN1O95631 604 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 IFI30P13284 250 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 PCYT1AP49585 367 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 EFNB1P98172 346 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 MEDAGQ5VYS4 303 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 SLC43A2Q8N370 569 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 CADM2Q8N3J6 435 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 BRIX1Q8TDN6 353 aaKnown RBP24.04■■□□□ 1.44
SHOX2-204ENST00000483851 GGHQ92820 318 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 BPIFA2Q96DR5 249 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 SLC19A3Q9BZV2 496 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 EGLN3Q9H6Z9 239 aa24.04■■□□□ 1.44
SHOX2-204ENST00000483851 CNOT2Q9NZN8 540 aaKnown RBP24.04■■□□□ 1.44
SHOX2-204ENST00000483851 PTRH2Q9Y3E5 179 aaKnown RBP24.04■■□□□ 1.44
SHOX2-204ENST00000483851 A0A087WUJ7 227 aa24.03■■□□□ 1.44
SHOX2-204ENST00000483851 UNC119BA6NIH7 251 aa24.03■■□□□ 1.44
SHOX2-204ENST00000483851 STK17BO94768 372 aa24.03■■□□□ 1.44
SHOX2-204ENST00000483851 IGF2P01344 180 aa24.03■■□□□ 1.44
SHOX2-204ENST00000483851 ETV5P41161 510 aa24.03■■□□□ 1.44
SHOX2-204ENST00000483851 MISPQ8IVT2 679 aa24.03■■□□□ 1.44
SHOX2-204ENST00000483851 DEPDC7Q96QD5 511 aa24.03■■□□□ 1.44
SHOX2-204ENST00000483851 SLC38A2Q96QD8 506 aa24.03■■□□□ 1.44
SHOX2-204ENST00000483851 COPS4Q9BT78 406 aa24.03■■□□□ 1.44
SHOX2-204ENST00000483851 TBL1XR1Q9BZK7 514 aa24.03■■□□□ 1.44
SHOX2-204ENST00000483851 PLA2G12AQ9BZM1 189 aa24.03■■□□□ 1.44
SHOX2-204ENST00000483851 C12orf10Q9HB07 376 aa24.03■■□□□ 1.44
SHOX2-204ENST00000483851 RYDENQ9NUL5 291 aaKnown RBP24.03■■□□□ 1.44
SHOX2-204ENST00000483851 PADI1Q9ULC6 663 aa24.03■■□□□ 1.44
SHOX2-204ENST00000483851 CACNA1HO95180 2353 aa24.03■■□□□ 1.44
SHOX2-204ENST00000483851 A0A1W2PQ72 361 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 FADS1O60427 444 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 UMODP07911 640 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 JMJD7P0C870 316 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 PNMTP11086 282 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 NR4A1P22736 598 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 ST13P50502 369 aaKnown RBP24.02■■□□□ 1.44
SHOX2-204ENST00000483851 NDUFAF6Q330K2 333 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 GLRX5Q86SX6 157 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 ZNF700Q9H0M5 742 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 DSN1Q9H410 356 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 MEPEQ9NQ76 525 aaPredicted RBP24.02■■□□□ 1.44
SHOX2-204ENST00000483851 MED17Q9NVC6 651 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 ICAM5Q9UMF0 924 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 KIF26BQ2KJY2 2108 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 CCDC187A0A096LP49 1063 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 EFCAB10A6NFE3 127 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 CDC42EP2O14613 210 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 SLC22A1O15245 554 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 NDUFB5O43674 189 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 CSO75390 466 aaKnown RBP24.02■■□□□ 1.44
SHOX2-204ENST00000483851 RCBTB2O95199 551 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 MT-CO3P00414 261 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 CDK1P06493 297 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 TGFBR2P37173 567 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 PCOLCEQ15113 449 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 EXT1Q16394 746 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 ACSM5Q6NUN0 579 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 CCDC81Q6ZN84 652 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 PFN4Q8NHR9 129 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 FCGR1BQ92637 280 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 BORCS5Q969J3 196 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 C3orf49Q96BT1 292 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 TBC1D23Q9NUY8 699 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 TVP23BQ9NYZ1 205 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 CARD8Q9Y2G2 431 aa24.02■■□□□ 1.44
SHOX2-204ENST00000483851 RAB40ALP0C0E4 278 aa24.01■■□□□ 1.43
SHOX2-204ENST00000483851 PIPP12273 146 aaPredicted RBP24.01■■□□□ 1.43
SHOX2-204ENST00000483851 BMXP51813 675 aa24.01■■□□□ 1.43
SHOX2-204ENST00000483851 TBCEQ15813 527 aaPredicted RBP24.01■■□□□ 1.43
SHOX2-204ENST00000483851 CCDC157Q569K6 752 aa24.01■■□□□ 1.43
SHOX2-204ENST00000483851 C6orf15Q6UXA7 325 aaPredicted RBP24.01■■□□□ 1.43
SHOX2-204ENST00000483851 P2RY8Q86VZ1 359 aa24.01■■□□□ 1.43
SHOX2-204ENST00000483851 OR8D4Q8NGM9 314 aa24.01■■□□□ 1.43
SHOX2-204ENST00000483851 ELP5Q8TE02 316 aa24.01■■□□□ 1.43
SHOX2-204ENST00000483851 C8orf44Q96CB5 159 aa24.01■■□□□ 1.43
SHOX2-204ENST00000483851 MESP1Q9BRJ9 268 aa24.01■■□□□ 1.43
SHOX2-204ENST00000483851 TSSK6Q9BXA6 273 aa24.01■■□□□ 1.43
SHOX2-204ENST00000483851 C20orf141Q9NUB4 165 aa24.01■■□□□ 1.43
SHOX2-204ENST00000483851 DLGAP3O95886 979 aa24■■□□□ 1.43
SHOX2-204ENST00000483851 LCKP06239 509 aa24■■□□□ 1.43
SHOX2-204ENST00000483851 MAKP20794 623 aa24■■□□□ 1.43
SHOX2-204ENST00000483851 PSMB9P28065 219 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms