RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 BPIFA2Q96DR5 249 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 ZNF582Q96NG8 517 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 CDCA4Q9BXL8 241 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 UBQLN3Q9H347 655 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 HHATLQ9HCP6 504 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 CNOT2Q9NZN8 540 aaKnown RBP8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 ZMAT5Q9UDW3 170 aaKnown RBP8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 NCOR2Q9Y618 2525 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 IGLV3-12A0A075B6K2 115 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 TRAV27A0A087WT01 109 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 C2orf92A0A1B0GVN3 265 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 IDSB3KWA1 339 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 LRRN3E7EW58 273 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 POLR1CO15160 346 aaPredicted RBP8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 SURF4O15260 269 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 CHP2O43745 196 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 ZNF354AO60765 605 aaPredicted RBP8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 IL33O95760 270 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 CD36P16671 472 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 MST1P26927 711 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 STAT5AP42229 794 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 VBP1P61758 197 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 ACY1Q03154 408 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 PRKCDQ05655 676 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 TIGD6Q17RP2 521 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 SLC25A30Q5SVS4 291 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 YOD1Q5VVQ6 348 aaPredicted RBP8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 LINC00114Q6XXX2 140 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 B3GLCTQ6Y288 498 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 BBS1Q8NFJ9 593 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 OR1N1Q8NGS0 311 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 OR51A7Q8NH64 312 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 NDNFQ8TB73 568 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 NAT6Q93015 286 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 LCORQ96JN0 433 aaPredicted RBP8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 ZNF559Q9BR84 538 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 TGIF2Q9GZN2 237 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 OR52D1Q9H346 318 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 TMEM27Q9HBJ8 222 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 QPCTLQ9NXS2 382 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 CARD8Q9Y2G2 431 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 EFCAB10A6NFE3 127 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 FRG2CA6NGY1 282 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 FAM183AA6NL82 134 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 ICOSLGO75144 302 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 UTS2O95399 124 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 HSMCR30P0CW71 290 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 ZNF28P17035 718 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 NR0B1P51843 470 aaKnown RBP8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 TMPRSS11FQ6ZWK6 438 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 P2RY8Q86VZ1 359 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 RNF113BQ8IZP6 322 aaKnown RBP8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 LRRC17Q8N6Y2 441 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 PLPP5Q8NEB5 264 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 ANKK1Q8NFD2 765 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 TMEM163Q8TC26 289 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 OSTF1Q92882 214 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 DAZLQ92904 295 aaKnown RBP8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 POLR2J2Q9GZM3 115 aaKnown RBP8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 WWTR1Q9GZV5 400 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 UBQLN4Q9NRR5 601 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 TBC1D23Q9NUY8 699 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 RARRES3Q9UL19 164 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 SRPK3Q9UPE1 567 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 SIGLEC7Q9Y286 467 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 CDH10Q9Y6N8 788 aa8.11□□□□□ -1.11
CDC42SE1-204ENST00000483763 KIF26BQ2KJY2 2108 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 UNC119BA6NIH7 251 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 PROB1E7EW31 1015 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 NTN3O00634 580 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 BHLHE40O14503 412 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 GMFGO60234 142 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 SAGP10523 405 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 PIPP12273 146 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 CCL4P13236 92 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 MED22Q15528 200 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 PGGHGQ32M88 737 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 ARMCX4Q5H9R4 360 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 ZNF362Q5T0B9 420 aaPredicted RBP8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 SLC35F1Q5T1Q4 408 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 AADACL4Q5VUY2 407 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 SMARCD3Q6STE5 483 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 SHFQ7M4L6 423 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 PPP1R3BQ86XI6 285 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 APCDD1LQ8NCL9 501 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 FAM71CQ8NEG0 241 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 WDR36Q8NI36 951 aaKnown RBP8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 Q96MT0 163 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 GFM1Q96RP9 751 aaKnown RBP8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 HCAR1Q9BXC0 346 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 RNF167Q9H6Y7 350 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 LSM2Q9Y333 95 aaKnown RBP8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 MED31Q9Y3C7 131 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 RPL36Q9Y3U8 105 aaKnown RBP8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 ALPK2Q86TB3 2170 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 DCDC2BA2VCK2 349 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 D6RAR5 112 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 DYRK3O43781 588 aa8.1□□□□□ -1.11
CDC42SE1-204ENST00000483763 PTP4A3O75365 173 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms