RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 ALG8Q9BVK2 526 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 SPATA5L1Q9BVQ7 753 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 TTYH1Q9H313 450 aaPredicted RBP13.27□□□□□ -0.29
COL9A2-207ENST00000482722 ZCCHC4Q9H5U6 513 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 NEUROD4Q9HD90 331 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 SEMA4GQ9NTN9 838 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 E9PI62 339 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 C8orf89P0DMQ9 161 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 ADRB3P13945 408 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 PCBP4P57723 403 aaKnown RBP13.26□□□□□ -0.29
COL9A2-207ENST00000482722 SLC3A1Q07837 685 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 TSPAN31Q12999 210 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 HLXQ14774 488 aaPredicted RBP13.26□□□□□ -0.29
COL9A2-207ENST00000482722 TMEM255AQ5JRV8 349 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 CPOQ8IVL8 374 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 NKAIN4Q8IVV8 208 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 HAVCR2Q8TDQ0 301 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 LGR4Q9BXB1 951 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 MS4A8Q9BY19 250 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 OR52A5Q9H2C5 316 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 NPDC1Q9NQX5 325 aaPredicted RBP13.26□□□□□ -0.29
COL9A2-207ENST00000482722 HPF1Q9NWY4 346 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 DEC1Q9P2X7 70 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 TNRC18O15417 2968 aaPredicted RBP13.26□□□□□ -0.29
COL9A2-207ENST00000482722 A0A1W2PS29 197 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 MCRIP1C9JLW8 97 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 PAPLNO95428 1278 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 LDOC1O95751 146 aaPredicted RBP13.26□□□□□ -0.29
COL9A2-207ENST00000482722 CBX7O95931 251 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 TGM6O95932 706 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 GDNFP39905 211 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 MAZP56270 477 aaKnown RBP13.26□□□□□ -0.29
COL9A2-207ENST00000482722 HTR4Q13639 388 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 ZNF234Q14588 700 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 GAB4Q2WGN9 574 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 OR5M10Q6IEU7 315 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 VRK2Q86Y07 508 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 TMEM99Q8N816 258 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 CLRN3Q8NCR9 226 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 ATOH1Q92858 354 aaPredicted RBP13.26□□□□□ -0.29
COL9A2-207ENST00000482722 LRIG1Q96JA1 1093 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 ASB16Q96NS5 453 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 SLC6A17Q9H1V8 727 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 GLIPR2Q9H4G4 154 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 EPHX3Q9H6B9 360 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 HINT3Q9NQE9 182 aaKnown RBP13.26□□□□□ -0.29
COL9A2-207ENST00000482722 CARNS1A5YM72 827 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 SYNDIG1LA6NDD5 238 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 CHURC1-FNTBB4DL54 471 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 AIPO00170 330 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 PGRMC2O15173 223 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 MID1O15344 667 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 PIP5K1CO60331 668 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 PTP4A3O75365 173 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 B3GALNT1O75752 331 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 FUT1P19526 365 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 TRHRP34981 398 aaPredicted RBP13.26□□□□□ -0.29
COL9A2-207ENST00000482722 SSR2P43308 183 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 CCR8P51685 355 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 FUT5Q11128 374 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 CDC73Q6P1J9 531 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 LCTLQ6UWM7 567 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 NUDT13Q86X67 352 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 DCUN1D3Q8IWE4 304 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 OR5W2Q8NH69 310 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 SETD7Q8WTS6 366 aaKnown RBP13.26□□□□□ -0.29
COL9A2-207ENST00000482722 SCARB1Q8WTV0 552 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 HMGB4Q8WW32 186 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 C7orf50Q9BRJ6 194 aaKnown RBP13.26□□□□□ -0.29
COL9A2-207ENST00000482722 TTTY10Q9BZA0 68 aa13.26□□□□□ -0.29
COL9A2-207ENST00000482722 FAM74A7A6NL05 159 aa13.25□□□□□ -0.29
COL9A2-207ENST00000482722 J3QRE1 110 aa13.25□□□□□ -0.29
COL9A2-207ENST00000482722 NDUFS4O43181 175 aa13.25□□□□□ -0.29
COL9A2-207ENST00000482722 LCMT2O60294 686 aaKnown RBP13.25□□□□□ -0.29
COL9A2-207ENST00000482722 RAD52P43351 418 aa13.25□□□□□ -0.29
COL9A2-207ENST00000482722 NCBP2P52298 156 aaKnown RBP eCLIP13.25□□□□□ -0.29
COL9A2-207ENST00000482722 SLC16A1P53985 500 aa13.25□□□□□ -0.29
COL9A2-207ENST00000482722 PITPNAQ00169 270 aa13.25□□□□□ -0.29
COL9A2-207ENST00000482722 PUS10Q3MIT2 529 aaKnown RBP13.25□□□□□ -0.29
COL9A2-207ENST00000482722 FAM74A3Q4VXF1 159 aa13.25□□□□□ -0.29
COL9A2-207ENST00000482722 C9orf64Q5T6V5 341 aa13.25□□□□□ -0.29
COL9A2-207ENST00000482722 SLC25A25Q6KCM7 469 aa13.25□□□□□ -0.29
COL9A2-207ENST00000482722 ACBD7Q8N6N7 88 aa13.25□□□□□ -0.29
COL9A2-207ENST00000482722 OR8D1Q8WZ84 308 aa13.25□□□□□ -0.29
COL9A2-207ENST00000482722 GCDHQ92947 438 aaPredicted RBP13.25□□□□□ -0.29
COL9A2-207ENST00000482722 TRMT61BQ9BVS5 477 aaKnown RBP13.25□□□□□ -0.29
COL9A2-207ENST00000482722 DPEP2Q9H4A9 486 aa13.25□□□□□ -0.29
COL9A2-207ENST00000482722 LHX9Q9NQ69 397 aa13.25□□□□□ -0.29
COL9A2-207ENST00000482722 EMC3Q9P0I2 261 aa13.25□□□□□ -0.29
COL9A2-207ENST00000482722 H2AFY2Q9P0M6 372 aaPredicted RBP13.25□□□□□ -0.29
COL9A2-207ENST00000482722 CA5BQ9Y2D0 317 aa13.25□□□□□ -0.29
COL9A2-207ENST00000482722 KLF2Q9Y5W3 355 aaPredicted RBP13.25□□□□□ -0.29
COL9A2-207ENST00000482722 OR6C65A6NJZ3 312 aa13.25□□□□□ -0.29
COL9A2-207ENST00000482722 ARPC1BO15143 372 aaKnown RBP13.25□□□□□ -0.29
COL9A2-207ENST00000482722 SUSD5O60279 629 aa13.25□□□□□ -0.29
COL9A2-207ENST00000482722 REM1O75628 298 aa13.25□□□□□ -0.29
COL9A2-207ENST00000482722 KDM4BO94953 1096 aa13.25□□□□□ -0.29
COL9A2-207ENST00000482722 HMGN2P05204 90 aaKnown RBP13.25□□□□□ -0.29
COL9A2-207ENST00000482722 ATF1P18846 271 aa13.25□□□□□ -0.29
COL9A2-207ENST00000482722 DDX6P26196 483 aaKnown RBP eCLIP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms