RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 FBXO27Q8NI29 283 aa6.93□□□□□ -1.3
CCNC-204ENST00000482541 PPP1R36Q96LQ0 422 aa6.93□□□□□ -1.3
CCNC-204ENST00000482541 PIP5K1AQ99755 562 aa6.93□□□□□ -1.3
CCNC-204ENST00000482541 KLHDC3Q9BQ90 382 aa6.93□□□□□ -1.3
CCNC-204ENST00000482541 HDHD5Q9BXW7 423 aa6.93□□□□□ -1.3
CCNC-204ENST00000482541 NUF2Q9BZD4 464 aa6.93□□□□□ -1.3
CCNC-204ENST00000482541 OR10A4Q9H209 315 aa6.93□□□□□ -1.3
CCNC-204ENST00000482541 POLE3Q9NRF9 147 aa6.93□□□□□ -1.3
CCNC-204ENST00000482541 BEX4Q9NWD9 120 aaPredicted RBP6.93□□□□□ -1.3
CCNC-204ENST00000482541 C6orf203Q9P0P8 240 aaPredicted RBP6.93□□□□□ -1.3
CCNC-204ENST00000482541 SPG11Q96JI7 2443 aa6.93□□□□□ -1.3
CCNC-204ENST00000482541 F8P00451 2351 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 PRRC2AP48634 2157 aaKnown RBP6.92□□□□□ -1.3
CCNC-204ENST00000482541 ANKHD1Q8IWZ3 2542 aaKnown RBP6.92□□□□□ -1.3
CCNC-204ENST00000482541 CCDC168Q8NDH2 2452 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 CSMD1Q96PZ7 3565 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 NPIPA5A0A0B4J1W7 369 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 RNF103-CHMP3A0A140T963 221 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 A0A1W2PPR1 153 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 TRPC5OSA6NMA1 111 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 DEFB108AA8MXU0 73 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 NPIPA7E9PJI5 369 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 SLCO1B7G3V0H7 640 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 M0R082 166 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 UGT2B17O75795 530 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 PRKD3O94806 890 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 NPIPA8P0DM63 369 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 UBL4AP11441 157 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 HOXC12P31275 282 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 S100A3P33764 101 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 SFTPDP35247 375 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 RAC3P60763 192 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 PHC1P78364 1004 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 TXNL4AP83876 142 aaKnown RBP6.92□□□□□ -1.3
CCNC-204ENST00000482541 BST1Q10588 318 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 FOXF1Q12946 379 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 GPR68Q15743 365 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 TMEM176BQ3YBM2 270 aaPredicted RBP6.92□□□□□ -1.3
CCNC-204ENST00000482541 TMEM201Q5SNT2 666 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 PDZK1Q5T2W1 519 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 ATAD3BQ5T9A4 648 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 HHATQ5VTY9 493 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 C8orf86Q6ZUL3 223 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 C16orf62Q7Z3J2 963 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 SPATA19Q7Z5L4 167 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 SLC43A2Q8N370 569 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 ZNF614Q8N883 585 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 OR4A15Q8NGL6 344 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 ZNF417Q8TAU3 575 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 RNF128Q8TEB7 428 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 XAGE5Q8WWM1 108 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 EDARADDQ8WWZ3 215 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 TMEM234Q8WY98 164 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 PIGTQ969N2 578 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 SLC35G5Q96KT7 338 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 ZNF587Q96SQ5 575 aaPredicted RBP6.92□□□□□ -1.3
CCNC-204ENST00000482541 THUMPD3Q9BV44 507 aaKnown RBP6.92□□□□□ -1.3
CCNC-204ENST00000482541 KLHL4Q9C0H6 718 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 ZNF350Q9GZX5 532 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 LAT2Q9GZY6 243 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 OR51I1Q9H343 314 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 SERHL2Q9H4I8 314 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 TMEM185BQ9H7F4 350 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 THAP1Q9NVV9 213 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 BTNL2Q9UIR0 455 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 MKLN1Q9UL63 735 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 GPR52Q9Y2T5 361 aa6.92□□□□□ -1.3
CCNC-204ENST00000482541 HIVEP1P15822 2718 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 E9PBE3 544 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 HDAC3O15379 428 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 OIP5O43482 229 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 CPSF4O95639 269 aaKnown RBP6.91□□□□□ -1.3
CCNC-204ENST00000482541 CSTAP01040 98 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 PGCP20142 388 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 PSMB1P20618 241 aaKnown RBP6.91□□□□□ -1.3
CCNC-204ENST00000482541 FPR1P21462 350 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 FKBP2P26885 142 aaKnown RBP6.91□□□□□ -1.3
CCNC-204ENST00000482541 AGTR1P30556 359 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 CCKARP32238 428 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 SELENBP1Q13228 472 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 SKP2Q13309 424 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 QPRTQ15274 297 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 TOMM34Q15785 309 aaPredicted RBP6.91□□□□□ -1.3
CCNC-204ENST00000482541 ZNF239Q16600 458 aaKnown RBP6.91□□□□□ -1.3
CCNC-204ENST00000482541 EXOC3L2Q2M3D2 409 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 FAM174BQ3ZCQ3 159 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 SPANXN4Q5MJ08 99 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 SAXO2Q658L1 398 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 STAC2Q6ZMT1 411 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 C22orf34Q6ZV56 151 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 EIF3MQ7L2H7 374 aaKnown RBP6.91□□□□□ -1.3
CCNC-204ENST00000482541 ZNF550Q7Z398 422 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 ANKRD46Q86W74 232 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 LRRC75A-AS1Q8N1F1 130 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 CLEC4FQ8N1N0 589 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 RFWD2Q8NHY2 731 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 RAB3IL1Q8TBN0 382 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 STK35Q8TDR2 534 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 ZFP90Q8TF47 636 aa6.91□□□□□ -1.3
CCNC-204ENST00000482541 ROBO4Q8WZ75 1007 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms