RNA–Protein interactions for RNA: ENST00000481121.5

NELFE-208, Transcript of negative elongation factor complex member E, humanhuman

TSL 2

Gene NELFE, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-208ENST00000481121 PRRG4Q9BZD6 226 aa18.69■□□□□ 0.58
NELFE-208ENST00000481121 RNF122Q9H9V4 155 aa18.69■□□□□ 0.58
NELFE-208ENST00000481121 DNAJB12Q9NXW2 375 aaKnown RBP18.69■□□□□ 0.58
NELFE-208ENST00000481121 KLHL14Q9P2G3 628 aa18.69■□□□□ 0.58
NELFE-208ENST00000481121 MCTS1Q9ULC4 181 aaKnown RBP18.69■□□□□ 0.58
NELFE-208ENST00000481121 ANKHD1Q8IWZ3 2542 aaKnown RBP18.69■□□□□ 0.58
NELFE-208ENST00000481121 FBN2P35556 2912 aa18.68■□□□□ 0.58
NELFE-208ENST00000481121 A0A0J9YW62 118 aa18.68■□□□□ 0.58
NELFE-208ENST00000481121 EVPLLA8MZ36 301 aa18.68■□□□□ 0.58
NELFE-208ENST00000481121 C5orf58C9J3I9 102 aa18.68■□□□□ 0.58
NELFE-208ENST00000481121 CXCL13O43927 109 aa18.68■□□□□ 0.58
NELFE-208ENST00000481121 SESN3P58005 492 aa18.68■□□□□ 0.58
NELFE-208ENST00000481121 GCNT6Q5T4J0 391 aa18.68■□□□□ 0.58
NELFE-208ENST00000481121 GDF7Q7Z4P5 450 aa18.68■□□□□ 0.58
NELFE-208ENST00000481121 DPP10Q8N608 796 aa18.68■□□□□ 0.58
NELFE-208ENST00000481121 ATP6V1C2Q8NEY4 427 aa18.68■□□□□ 0.58
NELFE-208ENST00000481121 OR52P1PQ8NH57 321 aa18.68■□□□□ 0.58
NELFE-208ENST00000481121 GMEB1Q9Y692 573 aa18.68■□□□□ 0.58
NELFE-208ENST00000481121 A0A0G2JPF8 293 aa18.67■□□□□ 0.58
NELFE-208ENST00000481121 A0A1W2PNV4 684 aa18.67■□□□□ 0.58
NELFE-208ENST00000481121 HNRNPCL2B2RXH8 293 aa18.67■□□□□ 0.58
NELFE-208ENST00000481121 HNRNPCL3B7ZW38 293 aa18.67■□□□□ 0.58
NELFE-208ENST00000481121 EFNA2O43921 213 aa18.67■□□□□ 0.58
NELFE-208ENST00000481121 HNRNPCL1O60812 293 aaKnown RBP18.67■□□□□ 0.58
NELFE-208ENST00000481121 SYNGR4O95473 234 aa18.67■□□□□ 0.58
NELFE-208ENST00000481121 CRHP06850 196 aa18.67■□□□□ 0.58
NELFE-208ENST00000481121 HNRNPCL4P0DMR1 293 aa18.67■□□□□ 0.58
NELFE-208ENST00000481121 SHC1P29353 583 aa18.67■□□□□ 0.58
NELFE-208ENST00000481121 UQCRC1P31930 480 aa18.67■□□□□ 0.58
NELFE-208ENST00000481121 EEF1A1P68104 462 aaKnown RBP18.67■□□□□ 0.58
NELFE-208ENST00000481121 MERTKQ12866 999 aa18.67■□□□□ 0.58
NELFE-208ENST00000481121 FBXL19-AS1Q494R0 122 aa18.67■□□□□ 0.58
NELFE-208ENST00000481121 EEF1A1P5Q5VTE0 462 aa18.67■□□□□ 0.58
NELFE-208ENST00000481121 DLEU7Q6UYE1 221 aa18.67■□□□□ 0.58
NELFE-208ENST00000481121 ZNF836Q6ZNA1 936 aa18.67■□□□□ 0.58
NELFE-208ENST00000481121 VRK2Q86Y07 508 aa18.67■□□□□ 0.58
NELFE-208ENST00000481121 CNEP1R1Q8N9A8 125 aa18.67■□□□□ 0.58
NELFE-208ENST00000481121 ZNF317Q96PQ6 595 aaPredicted RBP18.67■□□□□ 0.58
NELFE-208ENST00000481121 IKZF5Q9H5V7 419 aa18.67■□□□□ 0.58
NELFE-208ENST00000481121 ACER3Q9NUN7 267 aa18.67■□□□□ 0.58
NELFE-208ENST00000481121 ZNF443Q9Y2A4 671 aaPredicted RBP18.67■□□□□ 0.58
NELFE-208ENST00000481121 TNFSF13O75888 250 aa18.66■□□□□ 0.58
NELFE-208ENST00000481121 THBS1P07996 1170 aa18.66■□□□□ 0.58
NELFE-208ENST00000481121 SLC7A1P30825 629 aa18.66■□□□□ 0.58
NELFE-208ENST00000481121 NFYCQ13952 458 aa18.66■□□□□ 0.58
NELFE-208ENST00000481121 LARS2Q15031 903 aaKnown RBP18.66■□□□□ 0.58
NELFE-208ENST00000481121 PRAMEF8Q5VWM4 474 aa18.66■□□□□ 0.58
NELFE-208ENST00000481121 PRAMEF7Q5VXH5 474 aa18.66■□□□□ 0.58
NELFE-208ENST00000481121 PLEKHM3Q6ZWE6 761 aa18.66■□□□□ 0.58
NELFE-208ENST00000481121 RETREG3Q86VR2 466 aa18.66■□□□□ 0.58
NELFE-208ENST00000481121 DMRTC2Q8IXT2 367 aaPredicted RBP18.66■□□□□ 0.58
NELFE-208ENST00000481121 C10orf111Q8N326 155 aa18.66■□□□□ 0.58
NELFE-208ENST00000481121 BBS10Q8TAM1 723 aa18.66■□□□□ 0.58
NELFE-208ENST00000481121 RNASE6Q93091 150 aaKnown RBP18.66■□□□□ 0.58
NELFE-208ENST00000481121 CPPED1Q9BRF8 314 aaPredicted RBP18.66■□□□□ 0.58
NELFE-208ENST00000481121 TRIM8Q9BZR9 551 aa18.66■□□□□ 0.58
NELFE-208ENST00000481121 PIGMQ9H3S5 423 aa18.66■□□□□ 0.58
NELFE-208ENST00000481121 SERINC1Q9NRX5 453 aa18.66■□□□□ 0.58
NELFE-208ENST00000481121 FOXD3Q9UJU5 478 aaPredicted RBP18.66■□□□□ 0.58
NELFE-208ENST00000481121 PACSIN3Q9UKS6 424 aa18.66■□□□□ 0.58
NELFE-208ENST00000481121 NOTCH2Q04721 2471 aa18.65■□□□□ 0.58
NELFE-208ENST00000481121 MPDZO75970 2070 aa18.65■□□□□ 0.58
NELFE-208ENST00000481121 CDHR4A6H8M9 788 aa18.65■□□□□ 0.58
NELFE-208ENST00000481121 AP3D1O14617 1153 aa18.65■□□□□ 0.58
NELFE-208ENST00000481121 AQP8O94778 261 aa18.65■□□□□ 0.58
NELFE-208ENST00000481121 ARAFP10398 606 aa18.65■□□□□ 0.58
NELFE-208ENST00000481121 UQCRBP14927 111 aa18.65■□□□□ 0.58
NELFE-208ENST00000481121 SIRPAP78324 504 aa18.65■□□□□ 0.58
NELFE-208ENST00000481121 TMEM176BQ3YBM2 270 aaPredicted RBP18.65■□□□□ 0.58
NELFE-208ENST00000481121 RNF220Q5VTB9 566 aa18.65■□□□□ 0.58
NELFE-208ENST00000481121 GRINAQ7Z429 371 aa18.65■□□□□ 0.58
NELFE-208ENST00000481121 LUZP2Q86TE4 346 aa18.65■□□□□ 0.58
NELFE-208ENST00000481121 NFKBIDQ8NI38 313 aa18.65■□□□□ 0.58
NELFE-208ENST00000481121 CPNE4Q96A23 557 aaPredicted RBP18.65■□□□□ 0.58
NELFE-208ENST00000481121 BCL2L10Q9HD36 194 aa18.65■□□□□ 0.58
NELFE-208ENST00000481121 TIGARQ9NQ88 270 aa18.65■□□□□ 0.58
NELFE-208ENST00000481121 SAR1AQ9NR31 198 aa18.65■□□□□ 0.58
NELFE-208ENST00000481121 JKAMPQ9P055 326 aa18.65■□□□□ 0.58
NELFE-208ENST00000481121 SYT5O00445 386 aa18.64■□□□□ 0.58
NELFE-208ENST00000481121 ADAM11O75078 769 aa18.64■□□□□ 0.58
NELFE-208ENST00000481121 PRF1P14222 555 aa18.64■□□□□ 0.58
NELFE-208ENST00000481121 GPX2P18283 190 aa18.64■□□□□ 0.58
NELFE-208ENST00000481121 CPA2P48052 419 aa18.64■□□□□ 0.58
NELFE-208ENST00000481121 IDH2P48735 452 aaKnown RBP18.64■□□□□ 0.58
NELFE-208ENST00000481121 DLX5P56178 289 aa18.64■□□□□ 0.58
NELFE-208ENST00000481121 CARD18P57730 90 aa18.64■□□□□ 0.58
NELFE-208ENST00000481121 KLF10Q13118 480 aa18.64■□□□□ 0.58
NELFE-208ENST00000481121 RUNDC3AQ59EK9 446 aa18.64■□□□□ 0.58
NELFE-208ENST00000481121 ZNF440Q8IYI8 595 aa18.64■□□□□ 0.58
NELFE-208ENST00000481121 C10orf82Q8WW14 230 aa18.64■□□□□ 0.58
NELFE-208ENST00000481121 OSTF1Q92882 214 aa18.64■□□□□ 0.58
NELFE-208ENST00000481121 ANKRD27Q96NW4 1050 aa18.64■□□□□ 0.58
NELFE-208ENST00000481121 CGREF1Q99674 301 aa18.64■□□□□ 0.58
NELFE-208ENST00000481121 ARMC7Q9H6L4 198 aa18.64■□□□□ 0.58
NELFE-208ENST00000481121 COQ10BQ9H8M1 238 aa18.64■□□□□ 0.58
NELFE-208ENST00000481121 SLC24A3Q9HC58 644 aa18.64■□□□□ 0.58
NELFE-208ENST00000481121 RLIMQ9NVW2 624 aa18.64■□□□□ 0.58
NELFE-208ENST00000481121 ZNF232Q9UNY5 417 aa18.64■□□□□ 0.58
NELFE-208ENST00000481121 IFT52Q9Y366 437 aa18.64■□□□□ 0.58
NELFE-208ENST00000481121 SPIN1Q9Y657 262 aaPredicted RBP18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms