RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 CHN1P15882 459 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 TBXA2RP21731 343 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 NTSP30990 170 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 CPOXP36551 454 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 KCNJ5P48544 419 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 NCBP2P52298 156 aaKnown RBP eCLIP5.78□□□□□ -1.48
LRCH3-216ENST00000481048 SUCLG1P53597 346 aaKnown RBP5.78□□□□□ -1.48
LRCH3-216ENST00000481048 NR1H2P55055 460 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 CLDN15P56746 228 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 HNRNPA0Q13151 305 aaKnown RBP5.78□□□□□ -1.48
LRCH3-216ENST00000481048 GUSBP1Q15486 140 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 SGCBQ16585 318 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 IMPG1Q17R60 797 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 TMEM44Q2T9K0 475 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 VPS26BQ4G0F5 336 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 RAET1LQ5VY80 246 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 FAM71E1Q6IPT2 247 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 VWA1Q6PCB0 445 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 ZCCHC12Q6PEW1 402 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 SH2D5Q6ZV89 423 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 RHOUQ7L0Q8 258 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 MISPQ8IVT2 679 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 OR4N2Q8NGD1 307 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 CEP70Q8NHQ1 597 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 ACTRT2Q8TDY3 377 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 DUSP19Q8WTR2 217 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 HOXB13Q92826 284 aaPredicted RBP5.78□□□□□ -1.48
LRCH3-216ENST00000481048 C1GALT1C1Q96EU7 318 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 MARK4Q96L34 752 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 TMEM237Q96Q45 408 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 HBEGFQ99075 208 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 CCL19Q99731 98 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 LMF2Q9BU23 707 aaKnown RBP5.78□□□□□ -1.48
LRCH3-216ENST00000481048 PINK1Q9BXM7 581 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 ANKRA2Q9H9E1 313 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 MYNNQ9NPC7 610 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 RRAGDQ9NQL2 400 aaPredicted RBP5.78□□□□□ -1.48
LRCH3-216ENST00000481048 DDX18Q9NVP1 670 aaKnown RBP5.78□□□□□ -1.48
LRCH3-216ENST00000481048 MED11Q9P086 117 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 PROCRQ9UNN8 238 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 COL6A5A8TX70 2615 aa5.78□□□□□ -1.48
LRCH3-216ENST00000481048 B4DXG7 233 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 ALG1L2C9J202 215 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 H3BML4 177 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 ADAMDEC1O15204 470 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 SCO2O43819 266 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 TBX19O60806 448 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 RSL1D1O76021 490 aaKnown RBP5.77□□□□□ -1.49
LRCH3-216ENST00000481048 UTS2O95399 124 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 ANGPTL1O95841 491 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 JUNP05412 331 aaKnown RBP5.77□□□□□ -1.49
LRCH3-216ENST00000481048 PABPC4LP0CB38 370 aaKnown RBP5.77□□□□□ -1.49
LRCH3-216ENST00000481048 CTAGE8P0CG41 777 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 PRPS2P11908 318 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 ZNF17P17021 662 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 DDX5P17844 614 aaKnown RBP5.77□□□□□ -1.49
LRCH3-216ENST00000481048 NR4A1P22736 598 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 PRPH2P23942 346 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 GCAP28676 217 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 ECHS1P30084 290 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 MAP3K8P41279 467 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 CCT5P48643 541 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 HTR6P50406 440 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 CTBP2P56545 445 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 DNAJB13P59910 316 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 BTKQ06187 659 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 ZNF155Q12901 538 aaPredicted RBP5.77□□□□□ -1.49
LRCH3-216ENST00000481048 PON3Q15166 354 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 CCDC153Q494R4 210 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 BEX5Q5H9J7 111 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 Q5PR19 223 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 TCHHL1Q5QJ38 904 aaPredicted RBP5.77□□□□□ -1.49
LRCH3-216ENST00000481048 SH2D4BQ5SQS7 431 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 PDSS1Q5T2R2 415 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 UBAP2Q5T6F2 1119 aaKnown RBP5.77□□□□□ -1.49
LRCH3-216ENST00000481048 NOXRED1Q6NXP6 359 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 PLXDC2Q6UX71 529 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 RNF165Q6ZSG1 346 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 PLEKHM3Q6ZWE6 761 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 WDR75Q8IWA0 830 aaKnown RBP5.77□□□□□ -1.49
LRCH3-216ENST00000481048 CTAGE4Q8IX94 777 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 UBQLNLQ8IYU4 475 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 CDRT4Q8N9R6 151 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 ZNF610Q8N9Z0 462 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 OR6Y1Q8NGX8 325 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 OR6K3Q8NGY3 331 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 ZFP28Q8NHY6 868 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 FNDC9Q8TBE3 224 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 FIG4Q92562 907 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 ZBED6CLQ96FA7 236 aaPredicted RBP5.77□□□□□ -1.49
LRCH3-216ENST00000481048 PIK3IP1Q96FE7 263 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 GMPPAQ96IJ6 420 aaPredicted RBP5.77□□□□□ -1.49
LRCH3-216ENST00000481048 AMDHD1Q96NU7 426 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 HDHD5Q9BXW7 423 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 EBPLQ9BY08 206 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 PRRG4Q9BZD6 226 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 TBL1XR1Q9BZK7 514 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 OPN3Q9H1Y3 402 aaPredicted RBP5.77□□□□□ -1.49
LRCH3-216ENST00000481048 GLIPR2Q9H4G4 154 aa5.77□□□□□ -1.49
LRCH3-216ENST00000481048 GSTO2Q9H4Y5 243 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms