RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ASIC5Q9NY37 505 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 KLHL9Q9P2J3 617 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 LAMP3Q9UQV4 416 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 RNF115Q9Y4L5 304 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 FN1P02751 2386 aaKnown RBP13.55□□□□□ -0.24
LIMS3-203ENST00000480744 RGS16O15492 202 aaPredicted RBP13.54□□□□□ -0.24
LIMS3-203ENST00000480744 ERLIN1O75477 346 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 H6PDO95479 791 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 CD3EP07766 207 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 MYZAPP0CAP1 466 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 UBTFL6P0CB48 400 aaPredicted RBP13.54□□□□□ -0.24
LIMS3-203ENST00000480744 PCSK6P29122 969 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 ATP5J2P56134 94 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 RAC3P60763 192 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 ABCE1P61221 599 aaKnown RBP13.54□□□□□ -0.24
LIMS3-203ENST00000480744 RASGEF1BQ0VAM2 473 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 MERTKQ12866 999 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 SKP2Q13309 424 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 TAB1Q15750 504 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 ZNF141Q15928 474 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 ARHGAP11BQ3KRB8 267 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 SLC25A53Q5H9E4 307 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 ATAD3BQ5T9A4 648 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 C3orf33Q6P1S2 294 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.54□□□□□ -0.24
LIMS3-203ENST00000480744 PSD2Q9BQI7 771 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 LAT2Q9GZY6 243 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 NGBQ9NPG2 151 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 SERINC1Q9NRX5 453 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 KCNE5Q9UJ90 142 aa13.54□□□□□ -0.24
LIMS3-203ENST00000480744 RNASET2O00584 256 aaKnown RBP13.53□□□□□ -0.24
LIMS3-203ENST00000480744 SMAD9O15198 467 aaKnown RBP13.53□□□□□ -0.24
LIMS3-203ENST00000480744 UGT2B17O75795 530 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 OR12D1P0DN82 309 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 PGCP20142 388 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 SESN3P58005 492 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 RPS4XP62701 263 aaKnown RBP13.53□□□□□ -0.24
LIMS3-203ENST00000480744 P2RY6Q15077 328 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 STK11Q15831 433 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 SMU1Q2TAY7 513 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 TNFAIP8L2Q6P589 184 aaPredicted RBP13.53□□□□□ -0.24
LIMS3-203ENST00000480744 EIF3MQ7L2H7 374 aaKnown RBP13.53□□□□□ -0.24
LIMS3-203ENST00000480744 BHLHA15Q7RTS1 189 aaPredicted RBP13.53□□□□□ -0.24
LIMS3-203ENST00000480744 HMGN2P46Q86SG4 172 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 XAGE5Q8WWM1 108 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 IGFBPL1Q8WX77 278 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 TMEM234Q8WY98 164 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 ST8SIA1Q92185 356 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 HSD17B8Q92506 261 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 RAB8BQ92930 207 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 ZNF300Q96RE9 604 aaPredicted RBP13.53□□□□□ -0.24
LIMS3-203ENST00000480744 POTEKPQ9BYX7 375 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 ZNF350Q9GZX5 532 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 CENPHQ9H3R5 247 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 ESRP2Q9H6T0 727 aaKnown RBP13.53□□□□□ -0.24
LIMS3-203ENST00000480744 PRSS50Q9UI38 385 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 RAP2CQ9Y3L5 183 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 CADP27708 2225 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 ABCA2Q9BZC7 2435 aa13.53□□□□□ -0.24
LIMS3-203ENST00000480744 ZNF814B7Z6K7 855 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 SULT2B1O00204 365 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 CYTIPO60759 359 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 LYZL6O75951 148 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 FESP07332 822 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 TFPIP10646 304 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 UQCRC2P22695 453 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 RYKP34925 604 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 CHI3L1P36222 383 aaPredicted RBP13.52□□□□□ -0.25
LIMS3-203ENST00000480744 OR3A2P47893 321 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 SLC1A6P48664 564 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 RPL14P50914 215 aaKnown RBP13.52□□□□□ -0.25
LIMS3-203ENST00000480744 ITGADQ13349 1161 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 MPP2Q14168 576 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 CASP8Q14790 479 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 MAPK14Q16539 360 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 NCMAPQ5T1S8 102 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 ATG4DQ86TL0 474 aaPredicted RBP13.52□□□□□ -0.25
LIMS3-203ENST00000480744 ZNF100Q8IYN0 542 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 VPS37AQ8NEZ2 397 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 OR8J2Q8NGG1 315 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 ZNF563Q8TA94 476 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 NEUROG1Q92886 237 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 FBXW5Q969U6 566 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 DNAJA3Q96EY1 480 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 BCO1Q9HAY6 547 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 ZNF701Q9NV72 531 aaPredicted RBP13.52□□□□□ -0.25
LIMS3-203ENST00000480744 ING1Q9UK53 422 aaPredicted RBP13.52□□□□□ -0.25
LIMS3-203ENST00000480744 WDR45Q9Y484 360 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 ZANQ9Y493 2812 aa13.52□□□□□ -0.25
LIMS3-203ENST00000480744 CSPG4Q6UVK1 2322 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 PRSS51A0A1B0GVH4 220 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 ETV2O00321 342 aaPredicted RBP13.51□□□□□ -0.25
LIMS3-203ENST00000480744 BIRC5O15392 142 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 KIAA0513O60268 411 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 TMCC2O75069 709 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 AGR2O95994 175 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 PAX1P15863 534 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 H2AFXP16104 143 aaPredicted RBP13.51□□□□□ -0.25
LIMS3-203ENST00000480744 BGNP21810 368 aa13.51□□□□□ -0.25
LIMS3-203ENST00000480744 EDNRAP25101 427 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms