RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 SELENBP1Q13228 472 aa17.81■□□□□ 0.44
LIME1-205ENST00000480139 SAMD4BQ5PRF9 694 aaKnown RBP17.81■□□□□ 0.44
LIME1-205ENST00000480139 ZNF585AQ6P3V2 769 aa17.81■□□□□ 0.44
LIME1-205ENST00000480139 MTFR2Q6P444 385 aa17.81■□□□□ 0.44
LIME1-205ENST00000480139 CLEC18BQ6UXF7 455 aa17.81■□□□□ 0.44
LIME1-205ENST00000480139 GRINAQ7Z429 371 aa17.81■□□□□ 0.44
LIME1-205ENST00000480139 DEFB107AQ8IZN7 70 aa17.81■□□□□ 0.44
LIME1-205ENST00000480139 CLEC18CQ8NCF0 446 aa17.81■□□□□ 0.44
LIME1-205ENST00000480139 RBM15BQ8NDT2 890 aaKnown RBP17.81■□□□□ 0.44
LIME1-205ENST00000480139 ZPLD1Q8TCW7 415 aa17.81■□□□□ 0.44
LIME1-205ENST00000480139 PHF10Q8WUB8 498 aaKnown RBP17.81■□□□□ 0.44
LIME1-205ENST00000480139 SLC13A4Q9UKG4 626 aa17.81■□□□□ 0.44
LIME1-205ENST00000480139 CAMK2AQ9UQM7 478 aa17.81■□□□□ 0.44
LIME1-205ENST00000480139 MEMO1Q9Y316 297 aa17.81■□□□□ 0.44
LIME1-205ENST00000480139 MED12Q93074 2177 aa17.81■□□□□ 0.44
LIME1-205ENST00000480139 TENM4Q6N022 2769 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 LRRTM2O43300 516 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 LGI1O95970 557 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 OPN1SWP03999 348 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 GKN3PP0CG01 181 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 GP1BBP13224 206 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 HSD17B1P14061 328 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 CD247P20963 164 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 ME2P23368 584 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 HTR1EP28566 365 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 KDELR2P33947 212 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 APOBEC1P41238 236 aaKnown RBP17.8■□□□□ 0.44
LIME1-205ENST00000480139 SLC1A3P43003 542 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 STARP49675 285 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 FXNQ16595 210 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 DUSP7Q16829 419 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 GLIPR1L2Q4G1C9 344 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 PLEKHM3Q6ZWE6 761 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 GGNQ86UU5 652 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 COMTD1Q86VU5 262 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 ARHGAP24Q8N264 748 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 MEIOBQ8N635 442 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 SMYD1Q8NB12 490 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 SLC26A7Q8TE54 656 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 DMRTA2Q96SC8 542 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 GMPR2Q9P2T1 348 aaKnown RBP17.8■□□□□ 0.44
LIME1-205ENST00000480139 FAM215AQ9Y5M1 114 aa17.8■□□□□ 0.44
LIME1-205ENST00000480139 FASNP49327 2511 aaKnown RBP17.79■□□□□ 0.44
LIME1-205ENST00000480139 PHF3Q92576 2039 aaKnown RBP17.79■□□□□ 0.44
LIME1-205ENST00000480139 H0Y3Z8 333 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 CXCR6O00574 342 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 CCL21O00585 134 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 UBOX5O94941 541 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 PRG2P13727 222 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 ZNF136P52737 540 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 COPZ1P61923 177 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 NRF1Q16656 503 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 ACSF3Q4G176 576 aaPredicted RBP17.79■□□□□ 0.44
LIME1-205ENST00000480139 C1orf185Q5T7R7 199 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 RTL6Q6ICC9 239 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 WBP2NLQ6ICG8 309 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 C3orf33Q6P1S2 294 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 ADGRE4PQ86SQ3 457 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 GPR32P1Q8NGA4 272 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 UCN2Q96RP3 112 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 CDRT15Q96T59 188 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 ARHGDIGQ99819 225 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 ADAM19Q9H013 955 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 TESQ9UGI8 421 aaKnown RBP17.79■□□□□ 0.44
LIME1-205ENST00000480139 CD300AQ9UGN4 299 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 SH3BGRL2Q9UJC5 107 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 ERRFI1Q9UJM3 462 aaPredicted RBP17.79■□□□□ 0.44
LIME1-205ENST00000480139 BAG5Q9UL15 447 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 ARHGAP21Q5T5U3 1957 aa17.79■□□□□ 0.44
LIME1-205ENST00000480139 GJE1A6NN92 205 aa17.78■□□□□ 0.44
LIME1-205ENST00000480139 GSTA4O15217 222 aa17.78■□□□□ 0.44
LIME1-205ENST00000480139 EFNA2O43921 213 aa17.78■□□□□ 0.44
LIME1-205ENST00000480139 GGT1P19440 569 aa17.78■□□□□ 0.44
LIME1-205ENST00000480139 IL11P20809 199 aa17.78■□□□□ 0.44
LIME1-205ENST00000480139 FKBP2P26885 142 aaKnown RBP17.78■□□□□ 0.44
LIME1-205ENST00000480139 MAP2K6P52564 334 aa17.78■□□□□ 0.44
LIME1-205ENST00000480139 PER3P56645 1201 aa17.78■□□□□ 0.44
LIME1-205ENST00000480139 CLDN15P56746 228 aa17.78■□□□□ 0.44
LIME1-205ENST00000480139 CLDN20P56880 219 aa17.78■□□□□ 0.44
LIME1-205ENST00000480139 RGS8P57771 180 aaPredicted RBP17.78■□□□□ 0.44
LIME1-205ENST00000480139 MERTKQ12866 999 aa17.78■□□□□ 0.44
LIME1-205ENST00000480139 LRRC23Q53EV4 343 aaPredicted RBP17.78■□□□□ 0.44
LIME1-205ENST00000480139 TMEM211Q6ICI0 200 aa17.78■□□□□ 0.44
LIME1-205ENST00000480139 B3GNT6Q6ZMB0 384 aa17.78■□□□□ 0.44
LIME1-205ENST00000480139 RINLQ6ZS11 566 aa17.78■□□□□ 0.44
LIME1-205ENST00000480139 ESPNLQ6ZVH7 1005 aa17.78■□□□□ 0.44
LIME1-205ENST00000480139 FJX1Q86VR8 437 aa17.78■□□□□ 0.44
LIME1-205ENST00000480139 LILRA2Q8N149 483 aa17.78■□□□□ 0.44
LIME1-205ENST00000480139 FAM26EQ8N5C1 309 aa17.78■□□□□ 0.44
LIME1-205ENST00000480139 LSMEM1Q8N8F7 131 aa17.78■□□□□ 0.44
LIME1-205ENST00000480139 SLC25A43Q8WUT9 341 aaPredicted RBP17.78■□□□□ 0.44
LIME1-205ENST00000480139 SERINC1Q9NRX5 453 aa17.78■□□□□ 0.44
LIME1-205ENST00000480139 PAQR5Q9NXK6 330 aaPredicted RBP17.78■□□□□ 0.44
LIME1-205ENST00000480139 SPIN1Q9Y657 262 aaPredicted RBP17.78■□□□□ 0.44
LIME1-205ENST00000480139 CD8B2A6NJW9 211 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 ADAMDEC1O15204 470 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 FRS3O43559 492 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 FMO6PO60774 539 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 SEMA7AO75326 666 aa17.77■□□□□ 0.44
LIME1-205ENST00000480139 FESP07332 822 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms