RNA–Protein interactions for RNA: ENST00000478264.1

PLOD3-213, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 663 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-213ENST00000478264 CARM1Q86X55 608 aa16.46■□□□□ 0.23
PLOD3-213ENST00000478264 DHFR2Q86XF0 187 aa16.46■□□□□ 0.23
PLOD3-213ENST00000478264 VANGL1Q8TAA9 524 aaPredicted RBP16.46■□□□□ 0.23
PLOD3-213ENST00000478264 POC1BQ8TC44 478 aa16.46■□□□□ 0.23
PLOD3-213ENST00000478264 SARAFQ96BY9 339 aa16.46■□□□□ 0.23
PLOD3-213ENST00000478264 HSH2DQ96JZ2 352 aa16.46■□□□□ 0.23
PLOD3-213ENST00000478264 SPRR3Q9UBC9 169 aa16.46■□□□□ 0.23
PLOD3-213ENST00000478264 SH3GLB1Q9Y371 365 aa16.46■□□□□ 0.23
PLOD3-213ENST00000478264 BMP7P18075 431 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 ATP6V1B2P21281 511 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 PSMA4P25789 261 aaKnown RBP16.45■□□□□ 0.22
PLOD3-213ENST00000478264 SLC1A3P43003 542 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 HTR3AP46098 478 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 FOXK1P85037 733 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 HOXC5Q00444 222 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 CRYZQ08257 329 aaKnown RBP16.45■□□□□ 0.22
PLOD3-213ENST00000478264 IFI44LQ53G44 452 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 VASNQ6EMK4 673 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 ENPP6Q6UWR7 440 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 PLEKHM3Q6ZWE6 761 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 VTCN1Q7Z7D3 282 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 LACC1Q8IV20 430 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 CADM2Q8N3J6 435 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 LSMEM1Q8N8F7 131 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 OR6T1Q8NGN1 323 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 OR5M1Q8NGP8 315 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 GEMIN6Q8WXD5 167 aaKnown RBP16.45■□□□□ 0.22
PLOD3-213ENST00000478264 ABTB1Q969K4 478 aaPredicted RBP16.45■□□□□ 0.22
PLOD3-213ENST00000478264 ZNF524Q96C55 264 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 NPAS1Q99742 590 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 WFDC6Q9BQY6 131 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 ZNF559Q9BR84 538 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 UGT2B28Q9BY64 529 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 TRIM15Q9C019 465 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 TRIM2Q9C040 744 aa16.45■□□□□ 0.22
PLOD3-213ENST00000478264 CFAP46Q8IYW2 2715 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 BCKDKO14874 412 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 POU3F2P20265 443 aaPredicted RBP16.44■□□□□ 0.22
PLOD3-213ENST00000478264 TNFRSF1BP20333 461 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 HTR2AP28223 471 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 PTGS2P35354 604 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 APOBEC1P41238 236 aaKnown RBP16.44■□□□□ 0.22
PLOD3-213ENST00000478264 MS4A2Q01362 244 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 KCNC4Q03721 635 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 MERTKQ12866 999 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 SELENBP1Q13228 472 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 NPTX1Q15818 432 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 CYP2R1Q6VVX0 501 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 FKBP9P1Q75LS8 142 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 FGD2Q7Z6J4 655 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 CHERPQ8IWX8 916 aaKnown RBP16.44■□□□□ 0.22
PLOD3-213ENST00000478264 GALNT11Q8NCW6 608 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 OR4D11Q8NGI4 311 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 OR10Q1Q8NGQ4 319 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 POP5Q969H6 163 aaKnown RBP16.44■□□□□ 0.22
PLOD3-213ENST00000478264 LRGUKQ96M69 825 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 MCHR1Q99705 422 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 STOML1Q9UBI4 398 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 RPS6KB2Q9UBS0 482 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 SLC7A8Q9UHI5 535 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 ZNF337Q9Y3M9 751 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 AP4B1Q9Y6B7 739 aa16.44■□□□□ 0.22
PLOD3-213ENST00000478264 HEATR5AQ86XA9 2040 aa16.43■□□□□ 0.22
PLOD3-213ENST00000478264 SHANK1Q9Y566 2161 aa16.43■□□□□ 0.22
PLOD3-213ENST00000478264 NPIPA2E9PIF3 369 aa16.43■□□□□ 0.22
PLOD3-213ENST00000478264 NPIPA3F8WFD2 350 aa16.43■□□□□ 0.22
PLOD3-213ENST00000478264 H3BML4 177 aa16.43■□□□□ 0.22
PLOD3-213ENST00000478264 ACOT8O14734 319 aa16.43■□□□□ 0.22
PLOD3-213ENST00000478264 TPST2O60704 377 aa16.43■□□□□ 0.22
PLOD3-213ENST00000478264 IFNW1P05000 195 aa16.43■□□□□ 0.22
PLOD3-213ENST00000478264 PEPDP12955 493 aa16.43■□□□□ 0.22
PLOD3-213ENST00000478264 ABOP16442 354 aa16.43■□□□□ 0.22
PLOD3-213ENST00000478264 OR1E2P47887 323 aa16.43■□□□□ 0.22
PLOD3-213ENST00000478264 LHX2P50458 406 aa16.43■□□□□ 0.22
PLOD3-213ENST00000478264 POLR2HP52434 150 aaKnown RBP16.43■□□□□ 0.22
PLOD3-213ENST00000478264 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.43■□□□□ 0.22
PLOD3-213ENST00000478264 C3orf33Q6P1S2 294 aa16.43■□□□□ 0.22
PLOD3-213ENST00000478264 ATCAYQ86WG3 371 aa16.43■□□□□ 0.22
PLOD3-213ENST00000478264 RBM45Q8IUH3 476 aaKnown RBP16.43■□□□□ 0.22
PLOD3-213ENST00000478264 TIMP4Q99727 224 aa16.43■□□□□ 0.22
PLOD3-213ENST00000478264 POLR2J2Q9GZM3 115 aaKnown RBP16.43■□□□□ 0.22
PLOD3-213ENST00000478264 ADAM19Q9H013 955 aa16.43■□□□□ 0.22
PLOD3-213ENST00000478264 POLR2J3Q9H1A7 115 aaKnown RBP16.43■□□□□ 0.22
PLOD3-213ENST00000478264 TMEM27Q9HBJ8 222 aa16.43■□□□□ 0.22
PLOD3-213ENST00000478264 SERINC1Q9NRX5 453 aa16.43■□□□□ 0.22
PLOD3-213ENST00000478264 POMPQ9Y244 141 aa16.43■□□□□ 0.22
PLOD3-213ENST00000478264 SPIN1Q9Y657 262 aaPredicted RBP16.43■□□□□ 0.22
PLOD3-213ENST00000478264 PCNX3Q9H6A9 2034 aa16.43■□□□□ 0.22
PLOD3-213ENST00000478264 PRRC2CQ9Y520 2896 aaKnown RBP16.42■□□□□ 0.22
PLOD3-213ENST00000478264 PRKD3O94806 890 aa16.42■□□□□ 0.22
PLOD3-213ENST00000478264 TACR3P29371 465 aa16.42■□□□□ 0.22
PLOD3-213ENST00000478264 RAC1P63000 192 aa16.42■□□□□ 0.22
PLOD3-213ENST00000478264 FLOT2Q14254 428 aa16.42■□□□□ 0.22
PLOD3-213ENST00000478264 OR1Q1Q15612 314 aa16.42■□□□□ 0.22
PLOD3-213ENST00000478264 BCL2A1Q16548 175 aa16.42■□□□□ 0.22
PLOD3-213ENST00000478264 ZSCAN26Q16670 478 aa16.42■□□□□ 0.22
PLOD3-213ENST00000478264 ENTPD8Q5MY95 495 aa16.42■□□□□ 0.22
PLOD3-213ENST00000478264 DCST1Q5T197 706 aa16.42■□□□□ 0.22
PLOD3-213ENST00000478264 WLSQ5T9L3 541 aa16.42■□□□□ 0.22
PLOD3-213ENST00000478264 ZNF613Q6PF04 617 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms