RNA–Protein interactions for RNA: ENST00000478216.1

RC3H2-208, Transcript of ring finger and CCCH-type domains 2, human

TSL 3

Gene RC3H2, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RC3H2-208	ENST00000478216	ZCCHC12	Q6PEW1	402 aa		12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	CLHC1	Q8NHS4	586 aa		12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	GPR119	Q8TDV5	335 aa		12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	DCAKD	Q8WVC6	231 aa		12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	HOXB13	Q92826	284 aa	Predicted RBP	12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	L3HYPDH	Q96EM0	354 aa		12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	GIMAP5	Q96F15	307 aa		12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	TSSK3	Q96PN8	268 aa		12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	VRK1	Q99986	396 aa	Predicted RBP	12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	PRR14	Q9BWN1	585 aa		12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	ADAM19	Q9H013	955 aa		12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	QRSL1	Q9H0R6	528 aa	Known RBP	12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	REEP4	Q9H6H4	257 aa		12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	SERINC1	Q9NRX5	453 aa		12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	ZDHHC18	Q9NUE0	388 aa		12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	TAS2R16	Q9NYV7	291 aa		12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	ZNF180	Q9UJW8	692 aa		12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	ING1	Q9UK53	422 aa	Predicted RBP	12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	ICAM5	Q9UMF0	924 aa		12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	ACTL7B	Q9Y614	415 aa		12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	SLC25A15	Q9Y619	301 aa		12.49	□□□□□ -0.41
RC3H2-208	ENST00000478216	IGHV4-61	A0A0C4DH41	118 aa		12.48	□□□□□ -0.41
RC3H2-208	ENST00000478216	EXOC1L	A0A1B0GW35	172 aa		12.48	□□□□□ -0.41
RC3H2-208	ENST00000478216	SERTM1	A2A2V5	107 aa		12.48	□□□□□ -0.41
RC3H2-208	ENST00000478216	H6PD	O95479	791 aa		12.48	□□□□□ -0.41
RC3H2-208	ENST00000478216	UBL4A	P11441	157 aa		12.48	□□□□□ -0.41
RC3H2-208	ENST00000478216	DIO1	P49895	249 aa		12.48	□□□□□ -0.41
RC3H2-208	ENST00000478216	TP53BP2	Q13625	1128 aa		12.48	□□□□□ -0.41
RC3H2-208	ENST00000478216	TIGD2	Q4W5G0	525 aa		12.48	□□□□□ -0.41
RC3H2-208	ENST00000478216	ZNF385B	Q569K4	471 aa		12.48	□□□□□ -0.41
RC3H2-208	ENST00000478216	CFAP157	Q5JU67	520 aa		12.48	□□□□□ -0.41
RC3H2-208	ENST00000478216	DCST2	Q5T1A1	773 aa		12.48	□□□□□ -0.41
RC3H2-208	ENST00000478216	OR7E24	Q6IFN5	339 aa		12.48	□□□□□ -0.41
RC3H2-208	ENST00000478216	KLHL24	Q6TFL4	600 aa		12.48	□□□□□ -0.41
RC3H2-208	ENST00000478216	MEX3D	Q86XN8	651 aa	Known RBP	12.48	□□□□□ -0.41
RC3H2-208	ENST00000478216	OR5W2	Q8NH69	310 aa		12.48	□□□□□ -0.41
RC3H2-208	ENST00000478216	C1orf159	Q96HA4	380 aa		12.48	□□□□□ -0.41
RC3H2-208	ENST00000478216	KCNS3	Q9BQ31	491 aa		12.48	□□□□□ -0.41
RC3H2-208	ENST00000478216	GSTO2	Q9H4Y5	243 aa		12.48	□□□□□ -0.41
RC3H2-208	ENST00000478216	ANKZF1	Q9H8Y5	726 aa		12.48	□□□□□ -0.41
RC3H2-208	ENST00000478216	FAF1	Q9UNN5	650 aa	Predicted RBP	12.48	□□□□□ -0.41
RC3H2-208	ENST00000478216	CAD	P27708	2225 aa		12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	FREM1	Q5H8C1	2179 aa		12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	ATP6V1G2-DDX39B	F2Z307	99 aa		12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	ZNF264	O43296	627 aa		12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	MRPL33	O75394	65 aa	Known RBP	12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	HMGN2	P05204	90 aa	Known RBP	12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	DDX5	P17844	614 aa	Known RBP	12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	CASQ1	P31415	396 aa		12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	MERTK	Q12866	999 aa		12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	KLHL26	Q53HC5	615 aa		12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	CASP12	Q6UXS9	341 aa		12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	TRIM46	Q7Z4K8	759 aa		12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	ADAMTS15	Q8TE58	950 aa		12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	ZNF75CP	Q92670	426 aa	Predicted RBP	12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	DNAJA3	Q96EY1	480 aa		12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	FOXN4	Q96NZ1	517 aa		12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	SORCS2	Q96PQ0	1159 aa		12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	STAC	Q99469	402 aa		12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	CCT7	Q99832	543 aa		12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	PIGU	Q9H490	435 aa		12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	OCEL1	Q9H607	264 aa		12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	MYOZ1	Q9NP98	299 aa	Predicted RBP	12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	DUSP22	Q9NRW4	184 aa		12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	ACSS1	Q9NUB1	689 aa	Predicted RBP	12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	UPB1	Q9UBR1	384 aa		12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216	FIS1	Q9Y3D6	152 aa		12.47	□□□□□ -0.41
RC3H2-208	ENST00000478216		A0A087WUV0	522 aa	Predicted RBP	12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	LOC390937	A0A1W2PQ73	354 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	VWC2L	B2RUY7	222 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	GPR171	O14626	319 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	KRT16	P08779	473 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	MYL2	P10916	166 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	CFP	P27918	469 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	ATP12A	P54707	1039 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	RPL38	P63173	70 aa	Known RBP	12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	ACTG1	P63261	375 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	SYT14P1	Q58G82	188 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	SPATA19	Q7Z5L4	167 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	LCA5	Q86VQ0	697 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	ANKS4B	Q8N8V4	417 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	ZNF540	Q8NDQ6	660 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	PIGX	Q8TBF5	258 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	CCDC126	Q96EE4	140 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	FAM120B	Q96EK7	910 aa	Known RBP	12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	THUMPD3	Q9BV44	507 aa	Known RBP	12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	FUT8	Q9BYC5	575 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	BPESC1	Q9GZL8	116 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	C1orf109	Q9NX04	203 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	MOK	Q9UQ07	419 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	AMDHD2	Q9Y303	409 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	DTNA	Q9Y4J8	743 aa		12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	SPIN1	Q9Y657	262 aa	Predicted RBP	12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	YLPM1	P49750	1951 aa	Known RBP	12.46	□□□□□ -0.41
RC3H2-208	ENST00000478216	ALPK2	Q86TB3	2170 aa		12.46	□□□□□ -0.42
RC3H2-208	ENST00000478216		H3BQF6	201 aa		12.45	□□□□□ -0.42
RC3H2-208	ENST00000478216	SLC28A1	O00337	649 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms