RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 ZNF615Q8N8J6 731 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 FAM71CQ8NEG0 241 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 BABAM2Q9NXR7 383 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 PRODH2Q9UF12 536 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 HLA-DQB1P01920 261 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 PEPDP12955 493 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 HK1P19367 917 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 SEPHS1P49903 392 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 GGTLC2Q14390 218 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 DEFB110Q30KQ9 67 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 THSD4Q6ZMP0 1018 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 SHFQ7M4L6 423 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 SLC37A3Q8NCC5 494 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 OR13C2Q8NGS9 318 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 PTP4A1Q93096 173 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 HOXD1Q9GZZ0 328 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 IL20RAQ9UHF4 553 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 KLHL21Q9UJP4 597 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 RIIAD1A6NNX1 92 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 GABRPO00591 440 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 PPM1BO75688 479 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 APOL3O95236 402 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 DLGAP3O95886 979 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 CT45A8P0DMV1 189 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 CT45A9P0DMV2 189 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 ZNF3P17036 446 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 LCN1P31025 176 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 MTNR1BP49286 362 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 RACK1P63244 317 aaKnown RBP11.25□□□□□ -0.61
PTPRF-212ENST00000477970 ASAH1Q13510 395 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 CT45A2Q5DJT8 189 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 ATP6V1C2Q8NEY4 427 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 ACOT12Q8WYK0 555 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 MAP3K3Q99759 626 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 IFT27Q9BW83 186 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 KCNN2Q9H2S1 579 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 MCCC2Q9HCC0 563 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 YARS2Q9Y2Z4 477 aaKnown RBP11.25□□□□□ -0.61
PTPRF-212ENST00000477970 MMACHCQ9Y4U1 282 aa11.25□□□□□ -0.61
PTPRF-212ENST00000477970 RNF13O43567 381 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 RFPL3O75679 317 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 RGS9O75916 674 aaPredicted RBP11.24□□□□□ -0.61
PTPRF-212ENST00000477970 IFNGP01579 166 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 CD1AP06126 327 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 FNTBP49356 437 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.24□□□□□ -0.61
PTPRF-212ENST00000477970 DESI1Q6ICB0 168 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 NUP54Q7Z3B4 507 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 SLITRK4Q8IW52 837 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 RCBTB1Q8NDN9 531 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 TEAD3Q99594 435 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 TM9SF2Q99805 663 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 ALG8Q9BVK2 526 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 ENKD1Q9H0I2 346 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 ABCB9Q9NP78 766 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 TRIM36Q9NQ86 728 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 EXOSC3Q9NQT5 275 aaKnown RBP11.24□□□□□ -0.61
PTPRF-212ENST00000477970 HCN3Q9P1Z3 774 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 SIT1Q9Y3P8 196 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 NOX1Q9Y5S8 564 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 SLCO1B1Q9Y6L6 691 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 A0A1W2PQL4 384 aaPredicted RBP11.24□□□□□ -0.61
PTPRF-212ENST00000477970 RGS5O15539 181 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 PLPP2O43688 288 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 SPNP16150 400 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 COL9A2Q14055 689 aaPredicted RBP11.24□□□□□ -0.61
PTPRF-212ENST00000477970 ALG10BQ5I7T1 473 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 CCBE1Q6UXH8 406 aaPredicted RBP11.24□□□□□ -0.61
PTPRF-212ENST00000477970 DTWD2Q8NBA8 298 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 OR4C6Q8NH72 309 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 LIPHQ8WWY8 451 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 TMEM203Q969S6 136 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 MVB12AQ96EY5 273 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 PEX11GQ96HA9 241 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 OR10A5Q9H207 317 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 CHRNA9Q9UGM1 479 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 F5P12259 2224 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 A0A087WUJ7 227 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 C12orf71A8MTZ7 269 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 H3BMH7 237 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 CLEC2LP0C7M8 214 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 SAGP10523 405 aaPredicted RBP11.24□□□□□ -0.61
PTPRF-212ENST00000477970 IL7P13232 177 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 SSTR4P31391 388 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 MLLT3P42568 568 aaPredicted RBP11.24□□□□□ -0.61
PTPRF-212ENST00000477970 ZNF528Q3MIS6 628 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 KLHL26Q53HC5 615 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 FNDC7Q5VTL7 733 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 FRMD1Q8N878 549 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 BCORP1Q8N888 145 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 OR51G2Q8NGK0 314 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 HTRA1Q92743 480 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 GPX7Q96SL4 187 aaPredicted RBP11.24□□□□□ -0.61
PTPRF-212ENST00000477970 SLC38A3Q99624 504 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 ATF6BQ99941 703 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 ADGRL4Q9HBW9 690 aa11.24□□□□□ -0.61
PTPRF-212ENST00000477970 SERINC4A6NH21 518 aa11.23□□□□□ -0.61
PTPRF-212ENST00000477970 SNPHO15079 494 aa11.23□□□□□ -0.61
PTPRF-212ENST00000477970 POLR1CO15160 346 aaPredicted RBP11.23□□□□□ -0.61
PTPRF-212ENST00000477970 ADAM11O75078 769 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms