RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 VHLLQ6RSH7 139 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 GOLGA7Q7Z5G4 137 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 MISPQ8IVT2 679 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 FAM9CQ8IZT9 166 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 OR2L13Q8N349 312 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 ZNF527Q8NB42 609 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 ATP6V1C2Q8NEY4 427 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 NUP37Q8NFH4 326 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 OR4M2Q8NGB6 313 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 OR52E4Q8NGH9 312 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 B4GALNT2Q8NHY0 566 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 HOXB13Q92826 284 aaPredicted RBP6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 MAGOHBQ96A72 148 aaKnown RBP6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 EXOSC8Q96B26 276 aaKnown RBP6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 TMIGD2Q96BF3 282 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 BOD1Q96IK1 185 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 KATNB1Q9BVA0 655 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 ZNF442Q9H7R0 627 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 SLC35C2Q9NQQ7 365 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 CHMP2BQ9UQN3 213 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 NOSIPQ9Y314 301 aaKnown RBP6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 TEX264Q9Y6I9 313 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 LOC100653049A0A140TA62 436 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 SH3PXD2BA1X283 911 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 MYO1GB0I1T2 1018 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 OR7A17O14581 309 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 TIMM23O14925 209 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 MRPL33O75394 65 aaKnown RBP6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 PIAS1O75925 651 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 KRT34O76011 436 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 KCNH1O95259 989 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 MPZL1O95297 269 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 WNT11O96014 354 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 CRYAAP02489 173 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 STMN1P16949 149 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 NPR2P20594 1047 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 ACHEP22303 614 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 OMGP23515 440 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 SLC7A1P30825 629 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 CALCRP30988 508 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 THBS4P35443 961 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 IDH3AP50213 366 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 NAAAQ02083 359 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 HGFACQ04756 655 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 ILF2Q12905 390 aaKnown RBP6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 BAMBIQ13145 260 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 SLC9A3R2Q15599 337 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 TOMM34Q15785 309 aaPredicted RBP6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 PRSS53Q2L4Q9 553 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 BEAN1Q3B7T3 259 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 SLC9B1Q4ZJI4 515 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 KPRPQ5T749 579 aaPredicted RBP6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 C9orf135Q5VTT2 229 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 ABLIM2Q6H8Q1 611 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 CCDC137Q6PK04 289 aaKnown RBP6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 CBLN3Q6UW01 205 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 SPATA21Q7Z572 469 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 ZAR1Q86SH2 424 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 MTDHQ86UE4 582 aaKnown RBP6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 CDK20Q8IZL9 346 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 RIBC1Q8N443 379 aaPredicted RBP6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 SLC16A11Q8NCK7 471 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 RNF214Q8ND24 703 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 PIK3R3Q92569 461 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 SLC25A28Q96A46 364 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 TSPAN17Q96FV3 270 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 ZNF48Q96MX3 618 aaPredicted RBP6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 SLC38A2Q96QD8 506 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 DESI2Q9BSY9 194 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 C7orf69Q9H7B7 122 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 NOL11Q9H8H0 719 aaKnown RBP6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 C3orf14Q9HBI5 128 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 FARSBQ9NSD9 589 aaKnown RBP6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 EMC3Q9P0I2 261 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 SENP1Q9P0U3 644 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 MID2Q9UJV3 735 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 SLC12A4Q9UP95 1085 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 ACTL7BQ9Y614 415 aa6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 GPC6Q9Y625 555 aaPredicted RBP6.3□□□□□ -1.4
SPTLC1-205ENST00000477888 A0A1B0GUS0 222 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 A0A1W2PQD3 144 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 CCDC151A5D8V7 595 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 TTC36A6NLP5 189 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 ETV2O00321 342 aaPredicted RBP6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 OIP5O43482 229 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 SHOX2O60902 331 aaPredicted RBP6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 DEAF1O75398 565 aaPredicted RBP6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 SLITRK5O94991 958 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 H6PDO95479 791 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 ESRRBO95718 433 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 KNG1P01042 644 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 HPXP02790 462 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 PRB2P02812 416 aaPredicted RBP6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 IL3P08700 152 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 PRKCAP17252 672 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 CXCR5P32302 372 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 DIO1P49895 249 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 SLC16A1P53985 500 aa6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 ALDH18A1P54886 795 aaKnown RBP6.29□□□□□ -1.4
SPTLC1-205ENST00000477888 KRTAP10-3P60369 221 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms