RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 BTBD2Q9BX70 525 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 BHLHE41Q9C0J9 482 aaPredicted RBP9.95□□□□□ -0.82
BRCA1-213ENST00000476777 BPESC1Q9GZL8 116 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 FKRPQ9H9S5 495 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 MYOZ1Q9NP98 299 aaPredicted RBP9.95□□□□□ -0.82
BRCA1-213ENST00000476777 TAS2R16Q9NYV7 291 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 EMC3Q9P0I2 261 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 MALT1Q9UDY8 824 aa9.95□□□□□ -0.82
BRCA1-213ENST00000476777 TMEFF2Q9UIK5 374 aaPredicted RBP9.95□□□□□ -0.82
BRCA1-213ENST00000476777 VWFP04275 2813 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 NPIPA5A0A0B4J1W7 369 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 LRP5LA4QPB2 252 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 NPIPA7E9PJI5 369 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 NPIPB8E9PQR5 432 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 ATP6V1G2-DDX39BF2Z307 99 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 INHBAP08476 426 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 ITGA5P08648 1049 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 NPIPA8P0DM63 369 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 IMPDH1P20839 514 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 IL2RGP31785 369 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 DIO1P49895 249 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 FOXA1P55317 472 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 POU6F2P78424 691 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-213ENST00000476777 C2orf54Q08AI8 447 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 PDK3Q15120 406 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 ZSWIM7Q19AV6 140 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 TEX35Q5T0J7 233 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.94□□□□□ -0.82
BRCA1-213ENST00000476777 ABLIM2Q6H8Q1 611 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 OR7E24Q6IFN5 339 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 NOXRED1Q6NXP6 359 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 ZCCHC12Q6PEW1 402 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 LRIG3Q6UXM1 1119 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 SZRD1Q7Z422 152 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 ANKS4BQ8N8V4 417 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 ZNF540Q8NDQ6 660 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 SEMA6DQ8NFY4 1073 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 ZNF764Q96H86 408 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-213ENST00000476777 FUT8Q9BYC5 575 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 ANKZF1Q9H8Y5 726 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 ASB6Q9NWX5 421 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 GIN1Q9NXP7 522 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 NINJ2Q9NZG7 142 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 STK38LQ9Y2H1 464 aa9.94□□□□□ -0.82
BRCA1-213ENST00000476777 NOSIPQ9Y314 301 aaKnown RBP9.94□□□□□ -0.82
BRCA1-213ENST00000476777 A0A0A6YYJ9 748 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 ZNF716A6NP11 495 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 ESPNB1AK53 854 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 TRIM49D1C9J1S8 452 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 SLCO1B7G3V0H7 640 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 H3BNH8 94 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 PDLIM1O00151 329 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 GTPBP1O00178 669 aaKnown RBP9.93□□□□□ -0.82
BRCA1-213ENST00000476777 TAC1P20366 129 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 PHBP35232 272 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 FRKP42685 505 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-213ENST00000476777 SERPINB9P50453 376 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 PRKAA2P54646 552 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 SNRPD2P62316 118 aaKnown RBP9.93□□□□□ -0.82
BRCA1-213ENST00000476777 SLC25A3Q00325 362 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 QPRTQ15274 297 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 IMPG1Q17R60 797 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 TIGD2Q4W5G0 525 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 ZNF385BQ569K4 471 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 C3orf33Q6P1S2 294 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 TMPPEQ6ZT21 453 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 TRIM46Q7Z4K8 759 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 ZNF527Q8NB42 609 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 OR5W2Q8NH69 310 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 ZFP28Q8NHY6 868 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 JADE3Q92613 823 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 CDS1Q92903 461 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 L3HYPDHQ96EM0 354 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 STACQ99469 402 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 PAFAH2Q99487 392 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 HOXD1Q9GZZ0 328 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 IQCGQ9H095 443 aaKnown RBP9.93□□□□□ -0.82
BRCA1-213ENST00000476777 RAB17Q9H0T7 212 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 DUSP22Q9NRW4 184 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 TMEM216Q9P0N5 145 aa9.93□□□□□ -0.82
BRCA1-213ENST00000476777 NPIPB9F8W1W9 429 aa9.92□□□□□ -0.82
BRCA1-213ENST00000476777 LILRA1O75019 489 aa9.92□□□□□ -0.82
BRCA1-213ENST00000476777 RSL1D1O76021 490 aaKnown RBP9.92□□□□□ -0.82
BRCA1-213ENST00000476777 ATP6V1C1P21283 382 aa9.92□□□□□ -0.82
BRCA1-213ENST00000476777 ATP5F1P24539 256 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-213ENST00000476777 SERPINF1P36955 418 aa9.92□□□□□ -0.82
BRCA1-213ENST00000476777 MLC1Q15049 377 aa9.92□□□□□ -0.82
BRCA1-213ENST00000476777 KIAA0040Q15053 153 aa9.92□□□□□ -0.82
BRCA1-213ENST00000476777 MTDHQ86UE4 582 aaKnown RBP9.92□□□□□ -0.82
BRCA1-213ENST00000476777 C17orf78Q8N4C9 275 aa9.92□□□□□ -0.82
BRCA1-213ENST00000476777 C3orf56Q8N813 242 aa9.92□□□□□ -0.82
BRCA1-213ENST00000476777 LINC01356Q8N9X3 169 aa9.92□□□□□ -0.82
BRCA1-213ENST00000476777 OR52E4Q8NGH9 312 aa9.92□□□□□ -0.82
BRCA1-213ENST00000476777 RFWD2Q8NHY2 731 aa9.92□□□□□ -0.82
BRCA1-213ENST00000476777 DCAKDQ8WVC6 231 aa9.92□□□□□ -0.82
BRCA1-213ENST00000476777 HPS1Q92902 700 aa9.92□□□□□ -0.82
BRCA1-213ENST00000476777 FAM120BQ96EK7 910 aaKnown RBP9.92□□□□□ -0.82
BRCA1-213ENST00000476777 VRK1Q99986 396 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-213ENST00000476777 QRSL1Q9H0R6 528 aaKnown RBP9.92□□□□□ -0.82
BRCA1-213ENST00000476777 MID1IP1Q9NPA3 183 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms