RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 NDUFB2O95178 105 aa19.99■□□□□ 0.79
CCM2-206ENST00000474617 UTS2O95399 124 aa19.99■□□□□ 0.79
CCM2-206ENST00000474617 IL12BP29460 328 aa19.99■□□□□ 0.79
CCM2-206ENST00000474617 PNLIPRP2P54317 469 aa19.99■□□□□ 0.79
CCM2-206ENST00000474617 SSX1Q16384 188 aa19.99■□□□□ 0.79
CCM2-206ENST00000474617 MEPCEQ7L2J0 689 aaKnown RBP19.99■□□□□ 0.79
CCM2-206ENST00000474617 BCDIN3DQ7Z5W3 292 aaKnown RBP19.99■□□□□ 0.79
CCM2-206ENST00000474617 LAPTM4BQ86VI4 370 aa19.99■□□□□ 0.79
CCM2-206ENST00000474617 MEX3DQ86XN8 651 aaKnown RBP19.99■□□□□ 0.79
CCM2-206ENST00000474617 CADM2Q8N3J6 435 aa19.99■□□□□ 0.79
CCM2-206ENST00000474617 KLHL36Q8N4N3 616 aa19.99■□□□□ 0.79
CCM2-206ENST00000474617 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.99■□□□□ 0.79
CCM2-206ENST00000474617 LIPHQ8WWY8 451 aa19.99■□□□□ 0.79
CCM2-206ENST00000474617 CHCHD6Q9BRQ6 235 aa19.99■□□□□ 0.79
CCM2-206ENST00000474617 NXF5Q9H1B4 397 aaKnown RBP19.99■□□□□ 0.79
CCM2-206ENST00000474617 OR51E2Q9H255 320 aa19.99■□□□□ 0.79
CCM2-206ENST00000474617 ZBTB20Q9HC78 741 aaPredicted RBP19.99■□□□□ 0.79
CCM2-206ENST00000474617 ATP13A2Q9NQ11 1180 aa19.99■□□□□ 0.79
CCM2-206ENST00000474617 CLEC2DQ9UHP7 191 aa19.99■□□□□ 0.79
CCM2-206ENST00000474617 FBXO4Q9UKT5 387 aa19.99■□□□□ 0.79
CCM2-206ENST00000474617 MKL2Q9ULH7 1088 aa19.99■□□□□ 0.79
CCM2-206ENST00000474617 SPTBP11277 2137 aa19.99■□□□□ 0.79
CCM2-206ENST00000474617 ADAMTS20P59510 1910 aa19.99■□□□□ 0.79
CCM2-206ENST00000474617 TRIOO75962 3097 aa19.99■□□□□ 0.79
CCM2-206ENST00000474617 LY6G6EA0A0G2JKS1 128 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 LOC100506127A0A0U1RQW1 187 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 METTL15A6NJ78 407 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 PRR23D1E9PI22 279 aaPredicted RBP19.98■□□□□ 0.79
CCM2-206ENST00000474617 GTPBP1O00178 669 aaKnown RBP19.98■□□□□ 0.79
CCM2-206ENST00000474617 AKAP8O43823 692 aaKnown RBP19.98■□□□□ 0.79
CCM2-206ENST00000474617 ADRA2AP08913 450 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 TSPAN19P0C672 248 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 PRR23D2P0DMB1 279 aaPredicted RBP19.98■□□□□ 0.79
CCM2-206ENST00000474617 GAAP10253 952 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 GALP22466 123 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 OPRL1P41146 370 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 ETV5P41161 510 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 ETV1P50549 477 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 FXYD6P3P58550 94 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 PRPS1P60891 318 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 FOXK2Q01167 660 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 SRSF5Q13243 272 aaKnown RBP19.98■□□□□ 0.79
CCM2-206ENST00000474617 SKP2Q13309 424 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 TRA2AQ13595 282 aaKnown RBP eCLIP19.98■□□□□ 0.79
CCM2-206ENST00000474617 NIPAL3Q6P499 406 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 GUSBP11Q6P575 273 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 TMPRSS11AQ6ZMR5 421 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 C1orf210Q8IVY1 113 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 FNDC8Q8TC99 324 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 PIGKQ92643 395 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 UFD1Q92890 307 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 WWTR1Q9GZV5 400 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 PRDM6Q9NQX0 595 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 HAO2Q9NYQ3 351 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 TNFRSF10DQ9UBN6 386 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 ZNF337Q9Y3M9 751 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 PCDHGB6Q9Y5F9 930 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 PEX16Q9Y5Y5 336 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 U3KQA8 63 aa19.98■□□□□ 0.79
CCM2-206ENST00000474617 CPED1A4D0V7 1026 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 OR2W5A6NFC9 320 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 TAF4O00268 1085 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 CH25HO95992 272 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 CKMT1AP12532 417 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 ATP6V1E1P36543 226 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 SLC1A3P43003 542 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 CRYZQ08257 329 aaKnown RBP19.97■□□□□ 0.79
CCM2-206ENST00000474617 GPR50Q13585 617 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 CPOQ8IVL8 374 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 MISPQ8IVT2 679 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 PHC2Q8IXK0 858 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 SLC15A4Q8N697 577 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 OR13C2Q8NGS9 318 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 C3orf49Q96BT1 292 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 ARHGAP9Q9BRR9 750 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 HINT3Q9NQE9 182 aaKnown RBP19.97■□□□□ 0.79
CCM2-206ENST00000474617 WDR70Q9NW82 654 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 KPNA4O00629 521 aaPredicted RBP19.97■□□□□ 0.79
CCM2-206ENST00000474617 NTN1O95631 604 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 CD40LGP29965 261 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 S100A5P33763 92 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 MLLT10P55197 1068 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 CSTF1Q05048 431 aaKnown RBP19.97■□□□□ 0.79
CCM2-206ENST00000474617 NNATQ16517 81 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 ZNF574Q6ZN55 896 aaPredicted RBP19.97■□□□□ 0.79
CCM2-206ENST00000474617 DPY19L2P2Q6ZN68 376 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 GATAD2AQ86YP4 633 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 TMCO5AQ8N6Q1 288 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 ZNF441Q8N8Z8 693 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 EFHD2Q96C19 240 aaPredicted RBP19.97■□□□□ 0.79
CCM2-206ENST00000474617 NUDT9Q9BW91 350 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 GAREM1Q9H706 876 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 CRNNQ9UBG3 495 aaPredicted RBP19.97■□□□□ 0.79
CCM2-206ENST00000474617 PPIEQ9UNP9 301 aaKnown RBP19.97■□□□□ 0.79
CCM2-206ENST00000474617 SLC6A5Q9Y345 797 aa19.97■□□□□ 0.79
CCM2-206ENST00000474617 CAB39Q9Y376 341 aaPredicted RBP19.97■□□□□ 0.79
CCM2-206ENST00000474617 ARID1BQ8NFD5 2236 aaPredicted RBP19.96■□□□□ 0.79
CCM2-206ENST00000474617 PRUNE2Q8WUY3 3088 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 A0A075B6Q4 140 aa19.96■□□□□ 0.79
CCM2-206ENST00000474617 PNMA8CA0A1B0GUJ8 204 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms