RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 PTNP21246 168 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 FBLP22087 321 aaKnown RBP9.01□□□□□ -0.97
USP39-214ENST00000474572 RFX3P48380 749 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 ARL4DP49703 201 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 SEPHS1P49903 392 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 RPS3AP61247 264 aaKnown RBP9.01□□□□□ -0.97
USP39-214ENST00000474572 EBPQ15125 230 aaKnown RBP9.01□□□□□ -0.97
USP39-214ENST00000474572 ISXQ2M1V0 245 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 LIPKQ5VXJ0 399 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 LYSMD4Q5XG99 296 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 PMS2CLQ68D20 193 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 ARHGAP11AQ6P4F7 1023 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 COX15Q7KZN9 410 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 SHFQ7M4L6 423 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 CCDC190Q86UF4 302 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 LAPTM4BQ86VI4 370 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 TMEM151BQ8IW70 566 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 KLHL36Q8N4N3 616 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 SIRT6Q8N6T7 355 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 ZNF321PQ8N8H1 164 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 PLPP5Q8NEB5 264 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 OR4F15Q8NGB8 312 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 OR14A16Q8NHC5 309 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 B4GALNT2Q8NHY0 566 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 SLC2A12Q8TD20 617 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 LIPHQ8WWY8 451 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 UFD1Q92890 307 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 C3orf49Q96BT1 292 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 SGTBQ96EQ0 304 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 LCORQ96JN0 433 aaPredicted RBP9.01□□□□□ -0.97
USP39-214ENST00000474572 ART5Q96L15 291 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 GPX7Q96SL4 187 aaPredicted RBP9.01□□□□□ -0.97
USP39-214ENST00000474572 COQ7Q99807 217 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 NDC1Q9BTX1 674 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 DUSP23Q9BVJ7 150 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 BARHL1Q9BZE3 327 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 TGIF2Q9GZN2 237 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 NXF5Q9H1B4 397 aaKnown RBP9.01□□□□□ -0.97
USP39-214ENST00000474572 C12orf10Q9HB07 376 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 MKKSQ9NPJ1 570 aaPredicted RBP9.01□□□□□ -0.97
USP39-214ENST00000474572 PRMT8Q9NR22 394 aaPredicted RBP9.01□□□□□ -0.97
USP39-214ENST00000474572 UBQLN4Q9NRR5 601 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 INPP5EQ9NRR6 644 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 GALNT8Q9NY28 637 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 H2AFY2Q9P0M6 372 aaPredicted RBP9.01□□□□□ -0.97
USP39-214ENST00000474572 DHCR7Q9UBM7 475 aaKnown RBP9.01□□□□□ -0.97
USP39-214ENST00000474572 IL20RAQ9UHF4 553 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 OR10H1Q9Y4A9 318 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 UGT2A1Q9Y4X1 527 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 SPIN1Q9Y657 262 aaPredicted RBP9.01□□□□□ -0.97
USP39-214ENST00000474572 U3KQA8 63 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 IGKV1D-42A0A075B6H8 117 aa9□□□□□ -0.97
USP39-214ENST00000474572 TRDV1A0A1B0GX56 115 aa9□□□□□ -0.97
USP39-214ENST00000474572 A0A1W2PQD3 144 aa9□□□□□ -0.97
USP39-214ENST00000474572 ISPDA4D126 451 aa9□□□□□ -0.97
USP39-214ENST00000474572 OR6C76A6NM76 312 aa9□□□□□ -0.97
USP39-214ENST00000474572 PRR23D1E9PI22 279 aaPredicted RBP9□□□□□ -0.97
USP39-214ENST00000474572 MAGEB3O15480 346 aa9□□□□□ -0.97
USP39-214ENST00000474572 DYRK3O43781 588 aa9□□□□□ -0.97
USP39-214ENST00000474572 TSPAN2O60636 221 aa9□□□□□ -0.97
USP39-214ENST00000474572 UPK1BO75841 260 aa9□□□□□ -0.97
USP39-214ENST00000474572 NDUFB2O95178 105 aa9□□□□□ -0.97
USP39-214ENST00000474572 SNX4O95219 450 aa9□□□□□ -0.97
USP39-214ENST00000474572 APOL3O95236 402 aa9□□□□□ -0.97
USP39-214ENST00000474572 ONECUT2O95948 504 aa9□□□□□ -0.97
USP39-214ENST00000474572 TSPAN19P0C672 248 aa9□□□□□ -0.97
USP39-214ENST00000474572 OCM2P0CE71 109 aa9□□□□□ -0.97
USP39-214ENST00000474572 OCMP0CE72 109 aaPredicted RBP9□□□□□ -0.97
USP39-214ENST00000474572 PRR23D2P0DMB1 279 aaPredicted RBP9□□□□□ -0.97
USP39-214ENST00000474572 SAGP10523 405 aaPredicted RBP9□□□□□ -0.97
USP39-214ENST00000474572 PEPDP12955 493 aa9□□□□□ -0.97
USP39-214ENST00000474572 TGM1P22735 817 aa9□□□□□ -0.97
USP39-214ENST00000474572 RPS19P39019 145 aaKnown RBP9□□□□□ -0.97
USP39-214ENST00000474572 CD79BP40259 229 aa9□□□□□ -0.97
USP39-214ENST00000474572 ARRB1P49407 418 aaPredicted RBP9□□□□□ -0.97
USP39-214ENST00000474572 COPZ1P61923 177 aa9□□□□□ -0.97
USP39-214ENST00000474572 RPS4XP62701 263 aaKnown RBP9□□□□□ -0.97
USP39-214ENST00000474572 RPS25P62851 125 aaKnown RBP9□□□□□ -0.97
USP39-214ENST00000474572 CRYZQ08257 329 aaKnown RBP9□□□□□ -0.97
USP39-214ENST00000474572 SKP2Q13309 424 aa9□□□□□ -0.97
USP39-214ENST00000474572 ITGADQ13349 1161 aa9□□□□□ -0.97
USP39-214ENST00000474572 GPR50Q13585 617 aa9□□□□□ -0.97
USP39-214ENST00000474572 CD226Q15762 336 aa9□□□□□ -0.97
USP39-214ENST00000474572 NNATQ16517 81 aa9□□□□□ -0.97
USP39-214ENST00000474572 ZNF181Q2M3W8 571 aa9□□□□□ -0.97
USP39-214ENST00000474572 NDUFAF6Q330K2 333 aa9□□□□□ -0.97
USP39-214ENST00000474572 PEAR1Q5VY43 1037 aaPredicted RBP9□□□□□ -0.97
USP39-214ENST00000474572 VASNQ6EMK4 673 aa9□□□□□ -0.97
USP39-214ENST00000474572 RHBDD2Q6NTF9 364 aa9□□□□□ -0.97
USP39-214ENST00000474572 PLBD1Q6P4A8 553 aa9□□□□□ -0.97
USP39-214ENST00000474572 TMEM71Q6P5X7 295 aa9□□□□□ -0.97
USP39-214ENST00000474572 RTL4Q6ZR62 310 aa9□□□□□ -0.97
USP39-214ENST00000474572 NUP54Q7Z3B4 507 aa9□□□□□ -0.97
USP39-214ENST00000474572 ATG4DQ86TL0 474 aaPredicted RBP9□□□□□ -0.97
USP39-214ENST00000474572 OAFQ86UD1 273 aa9□□□□□ -0.97
USP39-214ENST00000474572 C11orf74Q86VG3 221 aa9□□□□□ -0.97
USP39-214ENST00000474572 GPR135Q8IZ08 494 aa9□□□□□ -0.97
USP39-214ENST00000474572 ARIH2OSQ8N7S6 290 aa9□□□□□ -0.97
USP39-214ENST00000474572 ZNF441Q8N8Z8 693 aa9□□□□□ -0.97
USP39-214ENST00000474572 ZNF527Q8NB42 609 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms